HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:255.0 nTPM
HPA:255.0 nTPM
GTEx:264.4 nTPM
FANTOM5:387.9 Scaled Tags Per Million
Pig:138.8 nTPM
Mouse:18.3 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051960
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 255.0
Sample id Sample description nTPM
Hippocampus
nTPM: 228.9
1898 Male, age 80, left hemisphere 265.2
1855 Male, age 76, left hemisphere 250.0
2621 Female, age 67, right hemisphere 235.1
2148 Female, age 91, left hemisphere 221.3
2529 Female, age 94, left hemisphere 203.7
1911 Female, age 85, right hemisphere 198.0
Dentate gyrus
nTPM: 238.6
1927 Female, age 91, both hemispheres 256.0
2530 Female, age 94, left hemisphere 254.4
2010 Male, age 76, both hemispheres 242.3
2246 Female, age 85, both hemispheres 231.3
2531 Female, age 67, both hemispheres 229.3
2528 Male, age 74, both hemispheres 218.3
Entorhinal gyrus
nTPM: 219.6
2613 Female, age 94, left hemisphere 255.1
2764 Male, age 80, right hemisphere 239.4
1938 Female, age 85, left hemisphere 220.5
1787 Male, age 76, left hemisphere 208.6
2686 Male, age 75, right hemisphere 199.0
2117 Female, age 91, right hemisphere 195.4
Hippocampus, CA1
nTPM: 255.0
2749 Male, age 80, left hemisphere 326.8
2045 Male, age 76, both hemispheres 247.2
1873 Female, age 85, both hemispheres 237.5
2527 Male, age 74, both hemispheres 233.6
2082 Female, age 91, right hemisphere 230.0
Hippocampus, CA2
nTPM: 229.8
1963 Male, age 80, left hemisphere 265.0
1892 Male, age 76, both hemispheres 254.9
2113 Female, age 91, right hemisphere 219.0
2437 Female, age 94, left hemisphere 214.6
1940 Female, age 85, left hemisphere 214.2
2249 Male, age 74, both hemispheres 211.4
Hippocampus, CA3
nTPM: 245.8
2137 Male, age 80, left hemisphere 294.1
2620 Female, age 94, left hemisphere 271.8
2861 Female, age 67, both hemispheres 246.6
1867 Male, age 76, both hemispheres 232.5
2436 Male, age 74, both hemispheres 230.4
1891 Female, age 85, both hemispheres 199.4
Parahippocampal cortex
nTPM: 217.0
1850 Male, age 80, both hemispheres 236.4
2245 Female, age 91, both hemispheres 234.4
1933 Female, age 85, both hemispheres 221.4
2693 Female, age 94, both hemispheres 221.3
2250 Female, age 67, right hemisphere 219.7
2532 Female, age 72, left hemisphere 214.0
1990 Female, age 91, right hemisphere 213.6
2018 Male, age 76, both hemispheres 212.0
2622 Female, age 67, right hemisphere 206.0
2692 Male, age 74, both hemispheres 191.6
Perirhinal gyrus
nTPM: 246.8
1847 Female, age 91, left hemisphere 271.9
1794 Male, age 80, right hemisphere 261.3
2521 Female, age 94, right hemisphere 245.3
1841 Female, age 85, right hemisphere 232.9
2848 Male, age 76, right hemisphere 222.4
Subiculum
nTPM: 203.7
1901 Male, age 80, both hemispheres 226.0
1977 Female, age 85, both hemispheres 221.5
2729 Female, age 91, right hemisphere 198.1
2619 Male, age 74, both hemispheres 196.8
2042 Male, age 76, both hemispheres 194.6
2438 Female, age 94, left hemisphere 185.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 264.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 264.4
Samples: 197

Max nTPM: 723.5
Min nTPM: 49.5
Std nTPM: 119.3
Median nTPM: 254.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 723.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 634.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 597.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 592.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 568.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 563.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 536.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 504.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 494.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 490.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 490.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 387.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 387.9
FF:10169-103B7 60 years, female 595.3
FF:10153-102I9 76 years, female 180.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 122.5
Samples: 4

Max nTPM: 162.7
Min nTPM: 96.7
Sample A Female 162.7
Sample B Female 132.3
Sample C Male 98.1
Sample D Male 96.7
Entorhinal cortex
nTPM: 93.6
Samples: 4

Max nTPM: 109.8
Min nTPM: 76.4
Sample A Female 105.6
Sample B Female 76.4
Sample C Male 109.8
Sample D Male 82.6
Subiculum
nTPM: 125.0
Samples: 4

Max nTPM: 161.1
Min nTPM: 102.6
Sample A Female 161.1
Sample B Female 105.8
Sample C Male 130.4
Sample D Male 102.6
Ventral hippocampus
nTPM: 138.8
Samples: 4

Max nTPM: 194.2
Min nTPM: 83.7
Sample A Female 147.7
Sample B Female 83.7
Sample C Male 194.2
Sample D Male 129.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 14.1
Sample A Male 16.8
Sample B Male 15.6
Sample C Female 14.1
Sample D Female 23.3
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 15.2
Sample A Male 19.0
Sample B Male 19.5
Sample C Female 15.2
Sample D Female 19.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68301682 Antisense, RP_041130_01_F06, Mouse strain C57BL/6J (56 days, male) 5.6
70194606 Antisense, RP_050517_01_G02, Mouse strain C57BL/6J (56 days, male) 0.0

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