HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.6 nTPM
HPA:48.6 nTPM
GTEx:44.0 nTPM
FANTOM5:101.2 Scaled Tags Per Million
Pig:32.7 nTPM
Mouse:62.6 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1898 Male, age 80, left hemisphere 41.9
2621 Female, age 67, right hemisphere 33.3
1855 Male, age 76, left hemisphere 32.3
2148 Female, age 91, left hemisphere 31.4
1911 Female, age 85, right hemisphere 28.6
2529 Female, age 94, left hemisphere 24.9
Dentate gyrus
nTPM: 34.1
1927 Female, age 91, both hemispheres 42.8
2531 Female, age 67, both hemispheres 39.7
2246 Female, age 85, both hemispheres 35.6
2528 Male, age 74, both hemispheres 31.7
2010 Male, age 76, both hemispheres 30.4
2530 Female, age 94, left hemisphere 24.5
Entorhinal gyrus
nTPM: 34.3
2764 Male, age 80, right hemisphere 39.0
1938 Female, age 85, left hemisphere 38.8
2613 Female, age 94, left hemisphere 37.0
1787 Male, age 76, left hemisphere 35.2
2686 Male, age 75, right hemisphere 30.8
2117 Female, age 91, right hemisphere 24.8
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 50.4
1873 Female, age 85, both hemispheres 39.7
2045 Male, age 76, both hemispheres 37.6
2527 Male, age 74, both hemispheres 31.8
2082 Female, age 91, right hemisphere 30.6
Hippocampus, CA2
nTPM: 34.4
1963 Male, age 80, left hemisphere 41.4
1892 Male, age 76, both hemispheres 40.7
1940 Female, age 85, left hemisphere 33.9
2113 Female, age 91, right hemisphere 31.6
2249 Male, age 74, both hemispheres 30.7
2437 Female, age 94, left hemisphere 27.9
Hippocampus, CA3
nTPM: 35.9
2137 Male, age 80, left hemisphere 46.1
2620 Female, age 94, left hemisphere 44.5
1867 Male, age 76, both hemispheres 33.3
2861 Female, age 67, both hemispheres 32.6
1891 Female, age 85, both hemispheres 31.3
2436 Male, age 74, both hemispheres 27.6
Parahippocampal cortex
nTPM: 36.7
1850 Male, age 80, both hemispheres 48.0
2693 Female, age 94, both hemispheres 42.6
1933 Female, age 85, both hemispheres 39.5
2245 Female, age 91, both hemispheres 37.4
2532 Female, age 72, left hemisphere 37.0
2250 Female, age 67, right hemisphere 36.6
1990 Female, age 91, right hemisphere 36.2
2622 Female, age 67, right hemisphere 32.7
2018 Male, age 76, both hemispheres 30.8
2692 Male, age 74, both hemispheres 26.3
Perirhinal gyrus
nTPM: 48.6
1794 Male, age 80, right hemisphere 52.1
1841 Female, age 85, right hemisphere 51.3
1847 Female, age 91, left hemisphere 49.6
2521 Female, age 94, right hemisphere 47.7
2848 Male, age 76, right hemisphere 42.3
Subiculum
nTPM: 29.0
1977 Female, age 85, both hemispheres 35.4
1901 Male, age 80, both hemispheres 33.3
2619 Male, age 74, both hemispheres 28.4
2729 Female, age 91, right hemisphere 27.3
2438 Female, age 94, left hemisphere 27.2
2042 Male, age 76, both hemispheres 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 92.6
Min nTPM: 20.2
Std nTPM: 16.0
Median nTPM: 39.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 92.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 84.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 84.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 78.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 78.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 76.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 74.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 73.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 73.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 73.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 73.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.2
FF:10153-102I9 76 years, female 110.4
FF:10169-103B7 60 years, female 92.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 35.3
Min nTPM: 26.0
Sample A Female 29.9
Sample B Female 35.3
Sample C Male 26.0
Sample D Male 32.5
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.3
Min nTPM: 30.5
Sample A Female 34.0
Sample B Female 32.1
Sample C Male 34.3
Sample D Male 30.5
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 35.7
Min nTPM: 27.8
Sample A Female 35.7
Sample B Female 28.9
Sample C Male 31.0
Sample D Male 27.8
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 33.1
Min nTPM: 28.8
Sample A Female 31.1
Sample B Female 28.8
Sample C Male 30.3
Sample D Male 33.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 74.1
Min nTPM: 53.1
Sample A Male 59.6
Sample B Male 53.8
Sample C Female 53.1
Sample D Female 74.1
Hippocampal formation
nTPM: 62.6
Samples: 4

Max nTPM: 78.0
Min nTPM: 46.8
Sample A Male 47.6
Sample B Male 77.9
Sample C Female 78.0
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
71234742 Antisense, RP_050505_04_D04, Mouse strain C57BL/6J (56 days, male) 14.4

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