HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:20.7 nTPM
FANTOM5:36.7 Scaled Tags Per Million
Pig:39.5 nTPM
Mouse:26.2 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
1898 Male, age 80, left hemisphere 16.2
2621 Female, age 67, right hemisphere 14.6
1911 Female, age 85, right hemisphere 13.4
1855 Male, age 76, left hemisphere 12.5
2529 Female, age 94, left hemisphere 11.0
2148 Female, age 91, left hemisphere 5.5
Dentate gyrus
nTPM: 10.1
2530 Female, age 94, left hemisphere 15.8
1927 Female, age 91, both hemispheres 13.9
2010 Male, age 76, both hemispheres 11.6
2246 Female, age 85, both hemispheres 9.4
2528 Male, age 74, both hemispheres 7.0
2531 Female, age 67, both hemispheres 2.8
Entorhinal gyrus
nTPM: 12.7
2764 Male, age 80, right hemisphere 21.9
1787 Male, age 76, left hemisphere 14.6
2686 Male, age 75, right hemisphere 13.7
1938 Female, age 85, left hemisphere 11.0
2613 Female, age 94, left hemisphere 8.4
2117 Female, age 91, right hemisphere 6.7
Hippocampus, CA1
nTPM: 16.1
2749 Male, age 80, left hemisphere 39.8
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 11.5
1873 Female, age 85, both hemispheres 9.8
2045 Male, age 76, both hemispheres 3.3
Hippocampus, CA2
nTPM: 13.9
1892 Male, age 76, both hemispheres 16.6
2249 Male, age 74, both hemispheres 14.4
2437 Female, age 94, left hemisphere 14.3
1963 Male, age 80, left hemisphere 14.2
2113 Female, age 91, right hemisphere 12.4
1940 Female, age 85, left hemisphere 11.5
Hippocampus, CA3
nTPM: 16.2
2137 Male, age 80, left hemisphere 45.0
2436 Male, age 74, both hemispheres 17.2
1867 Male, age 76, both hemispheres 15.4
2861 Female, age 67, both hemispheres 9.5
1891 Female, age 85, both hemispheres 8.0
2620 Female, age 94, left hemisphere 1.8
Parahippocampal cortex
nTPM: 17.5
2245 Female, age 91, both hemispheres 23.6
2693 Female, age 94, both hemispheres 21.8
1850 Male, age 80, both hemispheres 21.1
2532 Female, age 72, left hemisphere 19.7
2018 Male, age 76, both hemispheres 19.2
2250 Female, age 67, right hemisphere 18.5
2622 Female, age 67, right hemisphere 18.5
1933 Female, age 85, both hemispheres 15.0
1990 Female, age 91, right hemisphere 12.8
2692 Male, age 74, both hemispheres 4.9
Perirhinal gyrus
nTPM: 23.0
1794 Male, age 80, right hemisphere 28.6
2521 Female, age 94, right hemisphere 24.4
2848 Male, age 76, right hemisphere 23.2
1841 Female, age 85, right hemisphere 20.6
1847 Female, age 91, left hemisphere 18.3
Subiculum
nTPM: 12.3
1901 Male, age 80, both hemispheres 22.4
2042 Male, age 76, both hemispheres 16.4
2438 Female, age 94, left hemisphere 12.9
1977 Female, age 85, both hemispheres 10.4
2619 Male, age 74, both hemispheres 7.7
2729 Female, age 91, right hemisphere 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.7
Samples: 197

Max nTPM: 78.9
Min nTPM: 0.3
Std nTPM: 16.0
Median nTPM: 16.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 78.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 72.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 68.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 56.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 55.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 54.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 54.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 51.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 51.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 51.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.7
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 14.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 41.1
Min nTPM: 19.3
Sample A Female 41.1
Sample B Female 34.7
Sample C Male 32.6
Sample D Male 19.3
Entorhinal cortex
nTPM: 28.8
Samples: 4

Max nTPM: 29.6
Min nTPM: 28.1
Sample A Female 28.1
Sample B Female 29.2
Sample C Male 29.6
Sample D Male 28.1
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 39.9
Min nTPM: 30.3
Sample A Female 39.9
Sample B Female 30.3
Sample C Male 33.5
Sample D Male 31.1
Ventral hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 47.9
Min nTPM: 24.0
Sample A Female 39.4
Sample B Female 24.0
Sample C Male 46.8
Sample D Male 47.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 29.4
Min nTPM: 21.2
Sample A Male 21.2
Sample B Male 29.4
Sample C Female 26.8
Sample D Female 27.5
Hippocampal formation
nTPM: 23.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 21.2
Sample A Male 25.4
Sample B Male 23.4
Sample C Female 21.2
Sample D Female 24.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
70743868 Antisense, RP_050725_01_G08, Mouse strain C57BL/6J (56 days, male) 2.1
643550 Antisense, RP_040914_01_G09, Mouse strain C57BL/6J (56 days, male) 0.6

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