AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:50.9 nTPM
HPA:50.9 nTPM
GTEx:47.4 nTPM
FANTOM5:196.7 Scaled Tags Per Million
Pig:59.4 nTPM
Mouse:119.7 nTPM
Allen mouse:21.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Amygdala
nTPM: 50.9
2814 Male, age 76, right hemisphere 59.3
2695 Female, age 67, right hemisphere 55.1
2514 Male, age 75, right hemisphere 53.6
2517 Female, age 94, left hemisphere 45.2
1987 Female, age 91, left hemisphere 41.3
Basal amygdala
nTPM: 43.5
2609 Male, age 75, right hemisphere 54.9
2827 Female, age 67, right hemisphere 49.0
1955 Male, age 76, both hemispheres 45.2
2685 Female, age 94, left hemisphere 42.1
2110 Male, age 80, left hemisphere 37.7
2243 Female, age 91, right hemisphere 32.2
Central amygdala
nTPM: 48.0
1905 Male, age 76, both hemispheres 58.5
2826 Female, age 94, left hemisphere 58.3
2515 Male, age 75, right hemisphere 48.6
2239 Male, age 80, left hemisphere 37.6
2701 Female, age 91, right hemisphere 37.1
Corticomedial amygdala
nTPM: 41.0
2428 Male, age 75, right hemisphere 52.6
2240 Male, age 76, both hemispheres 49.0
2429 Female, age 94, left hemisphere 41.2
2535 Female, age 67, right hemisphere 38.8
2829 Male, age 80, left hemisphere 35.7
2242 Female, age 91, right hemisphere 28.8
Lateral amygdala
nTPM: 47.8
2516 Male, age 75, right hemisphere 59.4
2830 Female, age 67, right hemisphere 56.0
1883 Male, age 76, both hemispheres 52.2
2534 Female, age 94, left hemisphere 46.5
2256 Male, age 80, left hemisphere 37.3
2255 Female, age 91, right hemisphere 35.6
Stria terminalis, bed nucleus
nTPM: 37.4
1974 Female, age 91, both hemispheres 38.3
2201 Male, age 74, unknown 38.0
2486 Female, age 94, both hemispheres 35.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 47.4
Samples: 152

Max nTPM: 110.5
Min nTPM: 23.2
Std nTPM: 12.9
Median nTPM: 47.9
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 110.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 84.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 82.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 82.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 76.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 70.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 69.6
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 68.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 66.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 64.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 63.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 196.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 196.7
FF:10151-102I7 76 years, female 196.7

AMYGDALA - Pig RNA-seqi
Average nTPM 59.4
Pig sample Sample description nTPM
Amygdala
nTPM: 59.4
Samples: 4

Max nTPM: 65.8
Min nTPM: 51.7
Sample A Female 60.9
Sample B Female 65.8
Sample C Male 51.7
Sample D Male 59.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 119.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 119.7
Samples: 4

Max nTPM: 129.2
Min nTPM: 115.5
Sample A Male 117.3
Sample B Male 116.6
Sample C Female 129.2
Sample D Female 115.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 21.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 21.2
70302246 Antisense, RP_050607_03_H09, Mouse strain C57BL/6J (56 days, male) 21.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.