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RPS20
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1411.0 nTPM
HPA:1411.0 nTPM
GTEx:1454.9 nTPM
FANTOM5:520.1 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1411.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1341.6
1981 Female, age 72, midline 1403.4
2565 Male, age 75, midline 1384.3
2048 Male, age 55, midline 1318.6
2194 Female, age 79, both hemispheres 1307.5
2816 Male, age 47, midline 1294.1
Cervical spinal cord, dorsal horn
nTPM: 1340.7
2173 Female, age 72, unknown 1455.7
2296 Male, age 66, both hemispheres 1390.3
2069 Male, age 47, both hemispheres 1382.3
1877 Male, age 55, unknown 1336.5
2297 Male, age 75, both hemispheres 1240.0
2721 Male, age 90, both hemispheres 1239.5
Cervical spinal cord, ventral horn
nTPM: 1411.0
2480 Male, age 75, both hemispheres 1524.8
2809 Male, age 90, both hemispheres 1504.7
2098 Female, age 72, unknown 1479.1
2068 Male, age 55, unknown 1362.7
2295 Male, age 66, both hemispheres 1350.5
2820 Female, age 79, both hemispheres 1244.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1454.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1454.9
Samples: 159

Max nTPM: 3158.7
Min nTPM: 514.0
Std nTPM: 492.9
Median nTPM: 1416.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 3158.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2883.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2604.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2520.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2506.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2474.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2430.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2430.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2377.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2331.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2275.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2196.0
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2173.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2157.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2133.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2127.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2117.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2098.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2047.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2045.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2034.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2014.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1963.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1953.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1950.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1939.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1914.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1888.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1884.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1864.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1864.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1860.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1845.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1818.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1804.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1800.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1785.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1785.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1778.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1771.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1766.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1764.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1751.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1737.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1731.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1717.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1699.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1691.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1680.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1668.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1657.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1656.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1656.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1654.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1634.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1625.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1600.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1593.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1592.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1585.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1574.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1560.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1546.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1539.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1517.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1499.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1491.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1489.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1478.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1466.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1459.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1453.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1446.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1444.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1434.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1426.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1418.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1417.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1417.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1416.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1405.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1399.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1387.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1372.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1363.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1356.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1345.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1342.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1342.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1338.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1334.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1329.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1316.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1314.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1307.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1305.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1295.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1288.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1281.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1247.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1233.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1229.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1218.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1200.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1200.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1197.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1188.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1186.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1180.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1170.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1160.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1139.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1138.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1117.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1107.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1103.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1086.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1063.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1059.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1043.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1029.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1028.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1020.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1020.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1010.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1002.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 996.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 991.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 991.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 976.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 974.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 973.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 971.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 962.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 956.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 947.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 937.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 926.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 904.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 898.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 892.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 892.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 891.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 885.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 868.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 862.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 827.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 815.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 811.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 800.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 796.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 745.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 716.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 709.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 689.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 659.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 582.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 581.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 514.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 520.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 520.1
FF:10181-103D1 60 years, female 606.8
FF:10159-103A6 76 years, female 433.4

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