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RPS20
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1315.1 nTPM
HPA:1315.1 nTPM
GTEx:1320.2 nTPM
FANTOM5:349.0 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1315.1
Sample id Sample description nTPM
Amygdala
nTPM: 1315.1
2695 Female, age 67, right hemisphere 1380.5
2514 Male, age 75, right hemisphere 1317.1
1987 Female, age 91, left hemisphere 1297.8
2517 Female, age 94, left hemisphere 1292.2
2814 Male, age 76, right hemisphere 1287.9
Basal amygdala
nTPM: 1270.1
2827 Female, age 67, right hemisphere 1335.7
2110 Male, age 80, left hemisphere 1287.5
2609 Male, age 75, right hemisphere 1277.8
2685 Female, age 94, left hemisphere 1255.3
1955 Male, age 76, both hemispheres 1240.8
2243 Female, age 91, right hemisphere 1223.4
Central amygdala
nTPM: 1291.4
2826 Female, age 94, left hemisphere 1412.0
2515 Male, age 75, right hemisphere 1309.5
1905 Male, age 76, both hemispheres 1269.4
2239 Male, age 80, left hemisphere 1237.6
2701 Female, age 91, right hemisphere 1228.4
Corticomedial amygdala
nTPM: 1254.2
2428 Male, age 75, right hemisphere 1287.4
2535 Female, age 67, right hemisphere 1266.1
2829 Male, age 80, left hemisphere 1262.4
2429 Female, age 94, left hemisphere 1243.7
2240 Male, age 76, both hemispheres 1239.8
2242 Female, age 91, right hemisphere 1225.6
Lateral amygdala
nTPM: 1309.3
2830 Female, age 67, right hemisphere 1415.9
2516 Male, age 75, right hemisphere 1338.9
2534 Female, age 94, left hemisphere 1327.1
2256 Male, age 80, left hemisphere 1273.3
1883 Male, age 76, both hemispheres 1264.3
2255 Female, age 91, right hemisphere 1236.0
Stria terminalis, bed nucleus
nTPM: 1234.4
1974 Female, age 91, both hemispheres 1263.5
2486 Female, age 94, both hemispheres 1222.2
2201 Male, age 74, unknown 1217.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1320.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1320.2
Samples: 152

Max nTPM: 5054.3
Min nTPM: 620.4
Std nTPM: 615.7
Median nTPM: 1154.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 5054.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 3957.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 3296.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3287.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3176.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2714.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2471.1
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2393.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2214.4
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2185.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 2175.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2086.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2060.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 2019.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 2002.2
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1996.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1987.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1951.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1889.8
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1855.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1836.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1814.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1804.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1778.1
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1777.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1738.6
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1647.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1620.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1607.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1600.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1585.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1583.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1560.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1534.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1525.0
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1511.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1496.9
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1488.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1461.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1432.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1404.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1399.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1389.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1380.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1362.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1352.3
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1350.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1341.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1328.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1328.5
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1324.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1322.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1315.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1303.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1277.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1264.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1253.5
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1252.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1247.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1236.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1235.9
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1219.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1210.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1206.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1204.5
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1197.7
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1196.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1190.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1188.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1183.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1179.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1172.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1167.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1164.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1159.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1154.4
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 1154.1
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1152.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1147.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1141.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1140.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1137.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1133.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1132.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1131.8
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1128.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1124.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1118.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1116.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1112.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1105.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1104.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1100.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1097.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1093.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1087.9
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1082.3
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1078.2
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1078.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1066.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1061.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1051.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1050.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1046.9
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1044.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1042.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1040.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1025.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1013.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1005.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1002.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 990.5
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 981.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 978.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 969.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 956.2
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 948.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 946.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 939.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 936.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 925.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 916.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 912.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 891.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 888.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 887.9
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 867.8
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 860.6
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 850.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 836.1
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 820.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 816.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 812.2
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 811.0
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 809.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 801.2
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 789.3
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 781.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 779.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 778.1
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 773.5
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 769.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 764.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 733.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 709.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 703.1
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 687.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 686.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 662.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 650.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 631.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 620.4
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 349.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 349.0
FF:10151-102I7 76 years, female 349.0

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