We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS20
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPS20
TISSUE PRIMARY DATA PONS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1376.0 nTPM
HPA:1376.0 nTPM
FANTOM5:340.9 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 1376.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1328.5
2188 Female, age 91, both hemispheres 1359.9
2090 Male, age 80, both hemispheres 1354.7
2301 Female, age 85, both hemispheres 1333.1
1984 Male, age 76, both hemispheres 1266.4
Dorsal cochlear nucleus
nTPM: 1316.4
2802 Male, age 74, right hemisphere 1337.5
2187 Female, age 91, both hemispheres 1329.4
2378 Male, age 80, both hemispheres 1321.4
2370 Male, age 61, both hemispheres 1318.8
2058 Male, age 76, both hemispheres 1274.7
Dorsal tegmental nucleus
nTPM: 1312.9
2326 Male, age 74, both hemispheres 1329.5
2358 Male, age 61, both hemispheres 1323.4
2083 Male, age 80, both hemispheres 1319.0
1936 Male, age 76, left hemisphere 1279.7
Dorsolateral tegmental area
nTPM: 1324.2
2337 Male, age 61, both hemispheres 1384.2
2654 Male, age 80, both hemispheres 1352.2
2751 Female, age 85, both hemispheres 1317.9
2360 Male, age 74, both hemispheres 1303.4
2141 Male, age 76, both hemispheres 1263.4
Kolliker-Fuse nucleus
nTPM: 1319.6
2315 Male, age 76, right hemisphere 1347.6
2793 Female, age 91, left hemisphere 1317.2
2163 Male, age 80, both hemispheres 1293.9
Lateral lemniscal nuclei
nTPM: 1267.6
2746 Female, age 85, left hemisphere 1292.7
2320 Female, age 91, left hemisphere 1273.7
2169 Male, age 76, both hemispheres 1264.4
2453 Male, age 74, right hemisphere 1260.0
2036 Male, age 80, both hemispheres 1247.2
Lateral parabrachial nucleus
nTPM: 1323.9
2792 Male, age 76, both hemispheres 1372.0
2013 Male, age 80, both hemispheres 1353.7
2139 Female, age 85, right hemisphere 1299.4
2790 Male, age 61, both hemispheres 1270.6
Lateral vestibular nucleus
nTPM: 1293.2
2311 Male, age 80, both hemispheres 1325.9
2184 Male, age 76, both hemispheres 1260.4
Locus coeruleus
nTPM: 1277.4
2162 Male, age 80, both hemispheres 1294.8
2014 Male, age 55, unknown 1288.8
2123 Female, age 91, both hemispheres 1281.4
2720 Male, age 74, both hemispheres 1278.6
2317 Female, age 72, unknown 1274.5
1980 Male, age 76, both hemispheres 1270.6
2788 Male, age 74, unknown 1253.2
Medial olivary nucleus
nTPM: 1376.0
1943 Male, age 61, both hemispheres 1418.7
1962 Male, age 76, both hemispheres 1417.1
2138 Female, age 91, both hemispheres 1346.5
2851 Male, age 80, both hemispheres 1321.5
Medial parabrachial nucleus
nTPM: 1300.0
2170 Female, age 91, both hemispheres 1357.2
2463 Female, age 85, right hemisphere 1306.3
2854 Male, age 80, both hemispheres 1285.6
2786 Male, age 76, both hemispheres 1277.3
2156 Male, age 61, both hemispheres 1273.6
Medial periolivary nuclei
nTPM: 1285.9
2081 Male, age 80, both hemispheres 1315.6
2063 Male, age 76, both hemispheres 1301.6
2458 Female, age 91, both hemispheres 1290.2
2791 Male, age 74, right hemisphere 1277.8
2171 Female, age 85, both hemispheres 1244.1
Motor facial nucleus
nTPM: 1277.8
2126 Male, age 61, both hemispheres 1321.9
2062 Male, age 76, both hemispheres 1289.9
2365 Male, age 74, right hemisphere 1283.2
2795 Female, age 91, both hemispheres 1275.5
2697 Female, age 85, both hemispheres 1271.0
2327 Male, age 80, both hemispheres 1225.4
Motor trigeminal nucleus
nTPM: 1288.3
2335 Male, age 61, both hemispheres 1307.8
2321 Female, age 91, both hemispheres 1293.3
2560 Male, age 74, both hemispheres 1290.1
2309 Male, age 76, both hemispheres 1277.8
2079 Male, age 80, both hemispheres 1272.6
Nuclei of the trapezoid body
nTPM: 1281.9
1983 Male, age 76, both hemispheres 1345.4
2166 Male, age 80, both hemispheres 1280.6
2159 Male, age 61, both hemispheres 1270.0
2368 Female, age 91, both hemispheres 1268.4
2735 Female, age 85, both hemispheres 1245.0
Paramedian reticular nucleus
nTPM: 1308.0
2052 Male, age 76, both hemispheres 1320.1
2057 Male, age 80, both hemispheres 1319.6
2313 Male, age 61, both hemispheres 1314.4
2050 Female, age 85, both hemispheres 1277.8
Pontine nuclei
nTPM: 1291.7
2319 Female, age 91, both hemispheres 1330.1
2115 Male, age 80, left hemisphere 1307.2
1968 Male, age 76, left hemisphere 1300.7
2454 Male, age 74, left hemisphere 1296.9
2109 Female, age 72, unknown 1289.9
2727 Male, age 61, right hemisphere 1279.3
1863 Male, age 55, unknown 1272.4
2787 Female, age 85, both hemispheres 1257.4
Pontine raphe nucleus
nTPM: 1269.3
2853 Male, age 76, midline 1276.4
2122 Female, age 85, midline 1262.3
Posteroventral cochlear nucleus
nTPM: 1345.7
2135 Female, age 91, both hemispheres 1398.9
2341 Male, age 80, both hemispheres 1398.9
2371 Male, age 61, both hemispheres 1348.1
2070 Male, age 76, both hemispheres 1292.0
2752 Female, age 85, both hemispheres 1290.4
Principal sensory trigeminal nucleus
nTPM: 1270.9
2367 Female, age 91, left hemisphere 1304.7
2158 Male, age 61, both hemispheres 1278.6
2324 Male, age 76, both hemispheres 1255.5
2008 Male, age 80, left hemisphere 1244.7
Reticular pontine nucleus, caudal
nTPM: 1291.4
2559 Male, age 74, both hemispheres 1327.1
2092 Male, age 76, both hemispheres 1306.5
2457 Female, age 91, both hemispheres 1304.3
2332 Male, age 80, right hemisphere 1227.8
Reticular pontine nucleus, oral
nTPM: 1291.9
2366 Female, age 91, both hemispheres 1316.0
1939 Male, age 80, both hemispheres 1301.5
2167 Male, age 76, both hemispheres 1294.7
2361 Male, age 74, both hemispheres 1276.9
2012 Female, age 85, both hemispheres 1270.4
Reticulotegmental nucleus
nTPM: 1283.4
2452 Male, age 74, both hemispheres 1319.5
2322 Female, age 91, both hemispheres 1285.4
2333 Male, age 80, both hemispheres 1272.3
2325 Male, age 76, both hemispheres 1256.6
Spinal trigeminal nucleus, oral
nTPM: 1279.8
2164 Male, age 80, both hemispheres 1294.9
1978 Male, age 76, both hemispheres 1283.5
2737 Female, age 85, both hemispheres 1260.9
Subcoeruleus area
nTPM: 1290.0
2451 Male, age 74, both hemispheres 1329.7
2369 Female, age 85, left hemisphere 1321.5
1958 Male, age 80, both hemispheres 1276.3
2089 Male, age 76, left hemisphere 1268.6
2323 Female, age 91, left hemisphere 1253.9
Superior olive
nTPM: 1284.5
2020 Male, age 76, both hemispheres 1330.5
2364 Male, age 74, right hemisphere 1295.8
2561 Female, age 91, both hemispheres 1295.8
2329 Male, age 80, right hemisphere 1252.8
1875 Female, age 85, both hemispheres 1247.6
Superior vestibular nucleus
nTPM: 1321.2
2015 Male, age 80, both hemispheres 1336.1
2383 Male, age 74, both hemispheres 1327.4
2061 Male, age 76, both hemispheres 1300.1
Ventral periolivary nuclei
nTPM: 1282.2
2023 Male, age 76, both hemispheres 1337.3
2794 Female, age 91, left hemisphere 1282.1
2165 Male, age 80, both hemispheres 1271.0
2130 Female, age 85, both hemispheres 1238.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1286.4
2359 Male, age 61, both hemispheres 1306.2
2161 Male, age 80, both hemispheres 1294.8
2456 Female, age 91, both hemispheres 1293.7
1959 Male, age 76, both hemispheres 1290.6
2840 Female, age 85, both hemispheres 1276.9
2449 Male, age 74, both hemispheres 1256.1

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 340.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 340.9
FF:10182-103D2 60 years, female 348.4
FF:10165-103B3 76 years, female 333.4
Pons
Scaled Tags Per Million: 213.4
FF:10033-101E6 18-54 years, mixed 213.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.