HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.7 nTPM
HPA:96.7 nTPM
GTEx:38.9 nTPM
FANTOM5:171.2 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:281.5 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002815Antibody HPA003525Antibody CAB033782
Glial cells MediumHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.7
Sample id Sample description nTPM
Hippocampus
nTPM: 88.7
1898 Male, age 80, left hemisphere 103.7
2621 Female, age 67, right hemisphere 90.5
2529 Female, age 94, left hemisphere 86.2
2148 Female, age 91, left hemisphere 84.7
1855 Male, age 76, left hemisphere 84.3
1911 Female, age 85, right hemisphere 82.6
Dentate gyrus
nTPM: 87.9
2530 Female, age 94, left hemisphere 92.0
2528 Male, age 74, both hemispheres 91.8
1927 Female, age 91, both hemispheres 91.3
2010 Male, age 76, both hemispheres 88.4
2246 Female, age 85, both hemispheres 83.7
2531 Female, age 67, both hemispheres 80.0
Entorhinal gyrus
nTPM: 91.2
2764 Male, age 80, right hemisphere 103.6
1938 Female, age 85, left hemisphere 92.1
2613 Female, age 94, left hemisphere 91.3
1787 Male, age 76, left hemisphere 90.5
2117 Female, age 91, right hemisphere 89.6
2686 Male, age 75, right hemisphere 79.9
Hippocampus, CA1
nTPM: 92.2
2749 Male, age 80, left hemisphere 110.9
2527 Male, age 74, both hemispheres 95.0
1873 Female, age 85, both hemispheres 88.8
2082 Female, age 91, right hemisphere 85.5
2045 Male, age 76, both hemispheres 80.5
Hippocampus, CA2
nTPM: 93.5
2249 Male, age 74, both hemispheres 103.7
1963 Male, age 80, left hemisphere 97.2
1892 Male, age 76, both hemispheres 96.1
2437 Female, age 94, left hemisphere 91.8
1940 Female, age 85, left hemisphere 86.6
2113 Female, age 91, right hemisphere 85.4
Hippocampus, CA3
nTPM: 91.3
2436 Male, age 74, both hemispheres 111.4
2137 Male, age 80, left hemisphere 94.9
1867 Male, age 76, both hemispheres 90.8
1891 Female, age 85, both hemispheres 86.1
2620 Female, age 94, left hemisphere 84.0
2861 Female, age 67, both hemispheres 80.6
Parahippocampal cortex
nTPM: 89.5
1990 Female, age 91, right hemisphere 96.6
1850 Male, age 80, both hemispheres 95.9
2250 Female, age 67, right hemisphere 95.0
1933 Female, age 85, both hemispheres 92.0
2245 Female, age 91, both hemispheres 91.8
2532 Female, age 72, left hemisphere 86.7
2692 Male, age 74, both hemispheres 85.8
2693 Female, age 94, both hemispheres 84.6
2622 Female, age 67, right hemisphere 84.4
2018 Male, age 76, both hemispheres 82.3
Perirhinal gyrus
nTPM: 96.7
1847 Female, age 91, left hemisphere 108.6
1794 Male, age 80, right hemisphere 103.9
1841 Female, age 85, right hemisphere 93.3
2521 Female, age 94, right hemisphere 91.8
2848 Male, age 76, right hemisphere 85.8
Subiculum
nTPM: 89.9
1901 Male, age 80, both hemispheres 94.1
2619 Male, age 74, both hemispheres 94.1
1977 Female, age 85, both hemispheres 94.0
2438 Female, age 94, left hemisphere 91.3
2729 Female, age 91, right hemisphere 85.4
2042 Male, age 76, both hemispheres 80.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 74.9
Min nTPM: 11.0
Std nTPM: 13.5
Median nTPM: 37.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 73.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 71.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 70.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 65.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 63.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 62.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.2
FF:10169-103B7 60 years, female 224.9
FF:10153-102I9 76 years, female 117.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 93.1
Min nTPM: 49.3
Sample A Female 93.1
Sample B Female 68.0
Sample C Male 72.6
Sample D Male 49.3
Entorhinal cortex
nTPM: 62.4
Samples: 4

Max nTPM: 74.9
Min nTPM: 49.7
Sample A Female 61.5
Sample B Female 74.9
Sample C Male 63.3
Sample D Male 49.7
Subiculum
nTPM: 59.5
Samples: 4

Max nTPM: 79.4
Min nTPM: 49.8
Sample A Female 79.4
Sample B Female 53.9
Sample C Male 54.7
Sample D Male 49.8
Ventral hippocampus
nTPM: 67.3
Samples: 4

Max nTPM: 82.3
Min nTPM: 47.0
Sample A Female 76.3
Sample B Female 47.0
Sample C Male 82.3
Sample D Male 63.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 281.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 270.0
Samples: 4

Max nTPM: 280.3
Min nTPM: 264.8
Sample A Male 265.0
Sample B Male 280.3
Sample C Female 269.9
Sample D Female 264.8
Hippocampal formation
nTPM: 281.5
Samples: 4

Max nTPM: 295.0
Min nTPM: 264.8
Sample A Male 294.7
Sample B Male 271.4
Sample C Female 264.8
Sample D Female 295.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
68744540 Antisense, RP_050208_01_B03, Mouse strain C57BL/6J (56 days, male) 16.0

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