PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:165.8 nTPM
HPA:165.8 nTPM
FANTOM5:287.5 Scaled Tags Per Million
Pig:157.5 nTPM
Mouse:208.6 nTPM
Allen mouse:1.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 165.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 125.0
2301 Female, age 85, both hemispheres 136.5
2090 Male, age 80, both hemispheres 130.3
2188 Female, age 91, both hemispheres 125.2
1984 Male, age 76, both hemispheres 108.0
Area postrema
nTPM: 159.5
2799 Male, age 61, both hemispheres 187.4
2306 Male, age 80, both hemispheres 167.4
2054 Male, age 76, both hemispheres 123.8
Cuneate nuclei
nTPM: 124.2
2376 Male, age 61, both hemispheres 132.9
2381 Male, age 80, both hemispheres 130.5
2131 Male, age 76, both hemispheres 109.3
Dorsal cochlear nucleus
nTPM: 127.8
2378 Male, age 80, both hemispheres 133.8
2058 Male, age 76, both hemispheres 130.1
2802 Male, age 74, right hemisphere 125.4
2187 Female, age 91, both hemispheres 125.2
2370 Male, age 61, both hemispheres 124.5
Dorsal medullary reticular nucleus
nTPM: 125.5
2373 Male, age 61, both hemispheres 135.6
2040 Female, age 85, both hemispheres 121.7
2088 Male, age 76, both hemispheres 119.3
Dorsal motor vagal complex
nTPM: 118.0
2185 Male, age 76, both hemispheres 146.4
2000 Male, age 74, unknown 122.0
2807 Female, age 85, both hemispheres 115.4
2133 Female, age 91, both hemispheres 115.2
2643 Male, age 74, both hemispheres 114.8
2813 Female, age 72, unknown 112.0
2797 Male, age 61, both hemispheres 111.5
2844 Male, age 55, unknown 107.0
Dorsal tegmental nucleus
nTPM: 125.5
2083 Male, age 80, both hemispheres 138.3
2326 Male, age 74, both hemispheres 128.9
2358 Male, age 61, both hemispheres 118.9
1936 Male, age 76, left hemisphere 115.7
Dorsolateral tegmental area
nTPM: 133.6
2337 Male, age 61, both hemispheres 159.0
2751 Female, age 85, both hemispheres 146.6
2654 Male, age 80, both hemispheres 130.5
2360 Male, age 74, both hemispheres 122.7
2141 Male, age 76, both hemispheres 109.5
Gigantocellular reticular nuclei, medullary
nTPM: 129.8
2314 Male, age 61, both hemispheres 159.5
2387 Female, age 91, both hemispheres 129.5
1876 Female, age 85, both hemispheres 126.8
2310 Male, age 80, both hemispheres 126.3
2022 Male, age 76, right hemisphere 118.8
2462 Male, age 74, both hemispheres 118.0
Gigantocellular reticular nuclei, pars
nTPM: 116.2
2336 Male, age 61, both hemispheres 125.3
2330 Male, age 80, both hemispheres 120.2
2706 Male, age 80, both hemispheres 117.1
2084 Female, age 85, both hemispheres 114.5
2168 Male, age 76, both hemispheres 103.9
Inferior olive
nTPM: 135.2
2178 Male, age 61, both hemispheres 156.2
2563 Male, age 74, both hemispheres 138.8
2085 Female, age 85, both hemispheres 132.2
2379 Male, age 80, both hemispheres 125.3
2628 Female, age 91, both hemispheres 123.2
Kolliker-Fuse nucleus
nTPM: 130.2
2315 Male, age 76, right hemisphere 147.2
2793 Female, age 91, left hemisphere 123.2
2163 Male, age 80, both hemispheres 120.3
Lateral lemniscal nuclei
nTPM: 120.1
2746 Female, age 85, left hemisphere 136.9
2320 Female, age 91, left hemisphere 123.1
2036 Male, age 80, both hemispheres 121.4
2453 Male, age 74, right hemisphere 111.7
2169 Male, age 76, both hemispheres 107.3
Lateral medullary reticular nucleus
nTPM: 138.6
2305 Male, age 74, both hemispheres 162.9
2852 Male, age 80, both hemispheres 153.2
2374 Male, age 61, both hemispheres 136.4
2190 Female, age 85, both hemispheres 135.4
2804 Female, age 91, both hemispheres 123.1
2044 Male, age 76, both hemispheres 120.3
Lateral parabrachial nucleus
nTPM: 135.9
2013 Male, age 80, both hemispheres 141.4
2792 Male, age 76, both hemispheres 141.2
2790 Male, age 61, both hemispheres 136.0
2139 Female, age 85, right hemisphere 125.0
Lateral vestibular nucleus
nTPM: 119.3
2311 Male, age 80, both hemispheres 128.3
2184 Male, age 76, both hemispheres 110.4
Locus coeruleus
nTPM: 108.4
2317 Female, age 72, unknown 117.8
2162 Male, age 80, both hemispheres 114.1
2123 Female, age 91, both hemispheres 108.1
1980 Male, age 76, both hemispheres 107.1
2014 Male, age 55, unknown 104.9
2720 Male, age 74, both hemispheres 104.0
2788 Male, age 74, unknown 102.8
Medial olivary nucleus
nTPM: 160.2
1943 Male, age 61, both hemispheres 211.2
1962 Male, age 76, both hemispheres 149.6
2138 Female, age 91, both hemispheres 142.9
2851 Male, age 80, both hemispheres 136.9
Medial parabrachial nucleus
nTPM: 125.6
2170 Female, age 91, both hemispheres 136.6
2463 Female, age 85, right hemisphere 133.6
2854 Male, age 80, both hemispheres 122.2
2156 Male, age 61, both hemispheres 119.5
2786 Male, age 76, both hemispheres 115.8
Medial periolivary nuclei
nTPM: 121.3
2081 Male, age 80, both hemispheres 137.6
2791 Male, age 74, right hemisphere 135.4
2063 Male, age 76, both hemispheres 116.6
2458 Female, age 91, both hemispheres 114.9
2171 Female, age 85, both hemispheres 102.1
Medial vestibular nucleus
nTPM: 124.5
2801 Male, age 74, both hemispheres 141.9
2803 Female, age 91, both hemispheres 127.2
2093 Male, age 80, both hemispheres 125.1
2624 Male, age 61, both hemispheres 125.0
2743 Female, age 85, both hemispheres 121.3
2134 Male, age 76, both hemispheres 106.7
Motor facial nucleus
nTPM: 120.5
2126 Male, age 61, both hemispheres 139.2
2365 Male, age 74, right hemisphere 131.2
2062 Male, age 76, both hemispheres 114.6
2697 Female, age 85, both hemispheres 114.0
2327 Male, age 80, both hemispheres 113.7
2795 Female, age 91, both hemispheres 110.5
Motor hypoglossal nucleus
nTPM: 120.9
2132 Female, age 85, both hemispheres 128.6
2125 Female, age 91, both hemispheres 127.9
2182 Male, age 80, both hemispheres 123.4
2277 Male, age 76, both hemispheres 122.6
2461 Male, age 61, both hemispheres 102.0
Motor trigeminal nucleus
nTPM: 118.4
2560 Male, age 74, both hemispheres 123.4
2321 Female, age 91, both hemispheres 120.9
2079 Male, age 80, both hemispheres 120.3
2309 Male, age 76, both hemispheres 114.5
2335 Male, age 61, both hemispheres 113.1
Nuclei of the trapezoid body
nTPM: 113.9
2166 Male, age 80, both hemispheres 120.4
2368 Female, age 91, both hemispheres 117.9
1983 Male, age 76, both hemispheres 116.2
2159 Male, age 61, both hemispheres 114.9
2735 Female, age 85, both hemispheres 100.0
Nucleus ambiguus
nTPM: 134.0
2071 Male, age 76, both hemispheres 159.5
2096 Female, age 85, both hemispheres 108.4
Nucleus cuneatus
nTPM: 126.9
2380 Male, age 80, both hemispheres 150.0
2808 Female, age 85, both hemispheres 148.0
2564 Male, age 74, both hemispheres 125.1
2100 Male, age 76, both hemispheres 118.3
2562 Male, age 61, both hemispheres 114.9
2805 Female, age 91, both hemispheres 104.9
Nucleus gracilis
nTPM: 150.4
2382 Male, age 80, both hemispheres 166.2
2299 Female, age 85, both hemispheres 144.9
2627 Male, age 74, both hemispheres 140.0
Nucleus raphe magnus
nTPM: 117.3
2051 Male, age 76, both hemispheres 126.6
2459 Female, age 91, both hemispheres 125.4
2328 Male, age 80, both hemispheres 123.9
2455 Male, age 74, both hemispheres 122.0
2160 Male, age 61, both hemispheres 108.7
2172 Female, age 85, both hemispheres 97.3
Nucleus raphe obscurus
nTPM: 156.4
2142 Male, age 76, midline 165.3
2800 Male, age 61, midline 156.1
2845 Female, age 85, midline 147.8
Nucleus raphe pallidus
nTPM: 165.8
1924 Male, age 61, midline 231.9
2145 Male, age 76, midline 137.3
2183 Male, age 80, midline 128.3
Nucleus tractus solitarii
nTPM: 111.7
2656 Male, age 76, both hemispheres 117.9
2191 Female, age 85, both hemispheres 110.3
2307 Male, age 80, both hemispheres 110.0
2144 Female, age 91, right hemisphere 108.6
Paramedian reticular nucleus
nTPM: 124.5
2057 Male, age 80, both hemispheres 134.4
2313 Male, age 61, both hemispheres 131.6
2050 Female, age 85, both hemispheres 117.0
2052 Male, age 76, both hemispheres 115.2
Parvicellular reticular nuclei
nTPM: 121.4
2119 Male, age 80, both hemispheres 130.6
2095 Male, age 76, both hemispheres 126.6
2558 Male, age 74, both hemispheres 106.9
Parvicellular reticular nuclei, medullary
nTPM: 119.3
2181 Male, age 80, left hemisphere 121.7
2189 Female, age 91, both hemispheres 118.9
2091 Female, age 85, both hemispheres 117.4
Peritrigeminal nucleus
nTPM: 139.8
2067 Female, age 85, both hemispheres 149.6
2179 Male, age 61, both hemispheres 140.0
2136 Male, age 76, both hemispheres 129.7
Pontine nuclei
nTPM: 125.5
2454 Male, age 74, left hemisphere 140.0
2109 Female, age 72, unknown 134.5
2319 Female, age 91, both hemispheres 131.4
2115 Male, age 80, left hemisphere 129.3
2727 Male, age 61, right hemisphere 126.2
1863 Male, age 55, unknown 118.3
1968 Male, age 76, left hemisphere 116.2
2787 Female, age 85, both hemispheres 108.1
Pontine raphe nucleus
nTPM: 115.7
2853 Male, age 76, midline 118.0
2122 Female, age 85, midline 113.4
Posteroventral cochlear nucleus
nTPM: 131.8
2341 Male, age 80, both hemispheres 139.3
2135 Female, age 91, both hemispheres 138.7
2371 Male, age 61, both hemispheres 131.7
2070 Male, age 76, both hemispheres 131.4
2752 Female, age 85, both hemispheres 118.0
Prepositus hypoglossal nucleus
nTPM: 126.4
2855 Female, age 85, right hemisphere 136.9
2086 Male, age 80, both hemispheres 115.9
Principal sensory trigeminal nucleus
nTPM: 113.6
2367 Female, age 91, left hemisphere 127.3
2324 Male, age 76, both hemispheres 113.0
2008 Male, age 80, left hemisphere 109.8
2158 Male, age 61, both hemispheres 104.4
Reticular pontine nucleus, caudal
nTPM: 122.4
2559 Male, age 74, both hemispheres 131.9
2092 Male, age 76, both hemispheres 123.9
2457 Female, age 91, both hemispheres 123.4
2332 Male, age 80, right hemisphere 110.3
Reticular pontine nucleus, oral
nTPM: 129.7
1939 Male, age 80, both hemispheres 143.0
2361 Male, age 74, both hemispheres 128.3
2366 Female, age 91, both hemispheres 128.0
2012 Female, age 85, both hemispheres 124.9
2167 Male, age 76, both hemispheres 124.5
Reticulotegmental nucleus
nTPM: 119.5
2333 Male, age 80, both hemispheres 125.1
2322 Female, age 91, both hemispheres 124.1
2452 Male, age 74, both hemispheres 123.4
2325 Male, age 76, both hemispheres 105.4
Spinal trigeminal nucleus, caudal
nTPM: 128.5
2312 Male, age 61, both hemispheres 144.0
2308 Male, age 80, both hemispheres 137.9
2447 Male, age 76, both hemispheres 126.0
2642 Male, age 74, both hemispheres 119.3
2390 Female, age 91, both hemispheres 115.3
Spinal trigeminal nucleus, interpolar
nTPM: 116.9
2033 Male, age 80, both hemispheres 123.2
2386 Female, age 85, both hemispheres 122.0
2389 Female, age 91, both hemispheres 115.8
2066 Male, age 76, right hemisphere 114.3
2625 Male, age 61, both hemispheres 109.3
Spinal trigeminal nucleus, oral
nTPM: 116.8
1978 Male, age 76, both hemispheres 122.1
2164 Male, age 80, both hemispheres 118.3
2737 Female, age 85, both hemispheres 110.1
Spinal vestibular nucleus
nTPM: 128.4
2748 Male, age 76, both hemispheres 145.0
2806 Female, age 85, both hemispheres 127.1
2186 Female, age 91, both hemispheres 127.0
2780 Male, age 80, both hemispheres 126.6
2796 Male, age 61, both hemispheres 123.2
2384 Male, age 74, both hemispheres 121.6
Subcoeruleus area
nTPM: 122.8
2369 Female, age 85, left hemisphere 156.4
1958 Male, age 80, both hemispheres 118.5
2451 Male, age 74, both hemispheres 117.5
2323 Female, age 91, left hemisphere 112.0
2089 Male, age 76, left hemisphere 109.3
Superior olive
nTPM: 121.2
2364 Male, age 74, right hemisphere 136.8
2020 Male, age 76, both hemispheres 122.2
2329 Male, age 80, right hemisphere 119.9
2561 Female, age 91, both hemispheres 114.3
1875 Female, age 85, both hemispheres 112.9
Superior vestibular nucleus
nTPM: 130.8
2383 Male, age 74, both hemispheres 135.0
2015 Male, age 80, both hemispheres 132.3
2061 Male, age 76, both hemispheres 125.2
Ventral medullary reticular nucleus
nTPM: 140.0
2372 Male, age 61, both hemispheres 145.9
2060 Male, age 76, both hemispheres 134.1
Ventral periolivary nuclei
nTPM: 113.2
2023 Male, age 76, both hemispheres 129.0
2165 Male, age 80, both hemispheres 115.1
2794 Female, age 91, left hemisphere 106.6
2130 Female, age 85, both hemispheres 102.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 130.9
2180 Male, age 61, both hemispheres 140.1
2118 Male, age 80, both hemispheres 138.9
2741 Female, age 85, both hemispheres 128.6
1986 Male, age 76, both hemispheres 126.8
2302 Female, age 91, both hemispheres 120.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 124.1
2359 Male, age 61, both hemispheres 136.5
2161 Male, age 80, both hemispheres 130.6
2456 Female, age 91, both hemispheres 124.3
2840 Female, age 85, both hemispheres 118.7
2449 Male, age 74, both hemispheres 117.5
1959 Male, age 76, both hemispheres 117.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 287.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 232.4
FF:10165-103B3 76 years, female 234.6
FF:10182-103D2 60 years, female 230.2
Medulla oblongata
Scaled Tags Per Million: 287.5
FF:10174-103C3 60 years, female 384.8
FF:10038-101F2 18-64 years, mixed 255.5
FF:10155-103A2 76 years, female 222.1
Pons
Scaled Tags Per Million: 189.6
FF:10033-101E6 18-54 years, mixed 189.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 157.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 157.5
Samples: 4

Max nTPM: 223.7
Min nTPM: 89.5
Sample A Female 135.9
Sample B Female 89.5
Sample C Male 181.0
Sample D Male 223.7
Pons
nTPM: 102.9
Samples: 4

Max nTPM: 125.7
Min nTPM: 67.0
Sample A Female 108.2
Sample B Female 67.0
Sample C Male 110.7
Sample D Male 125.7

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 208.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 208.6
Samples: 4

Max nTPM: 230.2
Min nTPM: 190.5
Sample A Male 190.5
Sample B Male 201.6
Sample C Female 212.1
Sample D Female 230.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.7
69540635 Antisense, RP_050426_02_B06, Mouse strain C57BL/6J (56 days, male) 1.9
73520971 Antisense, RP_051017_04_E11, Mouse strain C57BL/6J (56 days, male) 1.4
Pons
Expression energy: 1.4
69540635 Antisense, RP_050426_02_B06, Mouse strain C57BL/6J (56 days, male) 2.1
73520971 Antisense, RP_051017_04_E11, Mouse strain C57BL/6J (56 days, male) 0.8

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