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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:157.1 nTPM
FANTOM5:116.2 Scaled Tags Per Million
Pig:42.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB002490
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 157.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 157.1
Samples: 246

Max nTPM: 386.5
Min nTPM: 38.1
Std nTPM: 65.7
Median nTPM: 144.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 386.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 358.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 348.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 336.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 335.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 318.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 310.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 306.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 299.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 297.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 292.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 283.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 268.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 268.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 262.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 261.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 260.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 257.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 256.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 254.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 253.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 253.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 251.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 251.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 249.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 249.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 247.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 247.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 243.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 242.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 241.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 239.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 238.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 236.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 234.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 234.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 232.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 230.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 226.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 224.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 223.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 221.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 221.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 219.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 218.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 216.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 216.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 214.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 214.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 212.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 212.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 211.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 209.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 209.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 206.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 205.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 202.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 199.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 197.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 196.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 193.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 193.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 191.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 190.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 190.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 188.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 188.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 188.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 187.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 187.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 186.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 186.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 184.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 183.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 182.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 182.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 181.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 181.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 180.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 180.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 179.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 178.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 175.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 175.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 175.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 174.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 174.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 174.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 173.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 172.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 171.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 171.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 171.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 170.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 169.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 168.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 166.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 165.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 163.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 163.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 162.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 161.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 161.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 159.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 159.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 158.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 157.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 156.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 156.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 154.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 153.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 151.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 150.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 150.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 147.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 147.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 146.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 145.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 145.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 144.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 144.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 143.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 143.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 141.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 141.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 141.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 141.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 137.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 137.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 136.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 136.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 135.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 135.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 134.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 133.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 132.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 132.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 131.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 130.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 128.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 128.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 128.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 128.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 127.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 126.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 126.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 125.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 125.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 124.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 124.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 124.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 123.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 122.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 121.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 120.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 117.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 116.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 115.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 115.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 115.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 114.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 114.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 114.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 113.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 113.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 112.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 111.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 111.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 111.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 110.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 109.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 109.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 108.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 107.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 107.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 104.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 104.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 103.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 102.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 101.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 101.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 100.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 98.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 98.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 97.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 97.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 96.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 95.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 95.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 93.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 93.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 92.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 92.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 91.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 89.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 88.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 88.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 85.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 84.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 82.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 81.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 81.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 80.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 77.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 77.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 76.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 75.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 75.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 71.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 67.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 65.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 63.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 58.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 53.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 43.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 41.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 38.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 116.2
FF:10164-103B2 76 years, female 116.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 42.9
Pig sample Sample description nTPM
Caudate
nTPM: 43.0
Samples: 4

Max nTPM: 50.0
Min nTPM: 38.0
Sample A Female 50.0
Sample B Female 38.0
Sample C Male 45.5
Sample D Male 38.3

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