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CD74
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:598.7 nTPM
HPA:598.7 nTPM
FANTOM5:1926.0 Scaled Tags Per Million
Pig:333.7 nTPM
Allen mouse:0.6 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 598.7
Sample id Sample description nTPM
Area postrema
nTPM: 490.2
2799 Male, age 61, both hemispheres 555.5
2306 Male, age 80, both hemispheres 520.0
2054 Male, age 76, both hemispheres 395.0
Cuneate nuclei
nTPM: 389.7
2376 Male, age 61, both hemispheres 433.3
2381 Male, age 80, both hemispheres 381.6
2131 Male, age 76, both hemispheres 354.1
Dorsal medullary reticular nucleus
nTPM: 350.8
2373 Male, age 61, both hemispheres 393.9
2088 Male, age 76, both hemispheres 330.4
2040 Female, age 85, both hemispheres 327.9
Dorsal motor vagal complex
nTPM: 449.5
2807 Female, age 85, both hemispheres 803.0
2643 Male, age 74, both hemispheres 551.1
2813 Female, age 72, unknown 540.5
2133 Female, age 91, both hemispheres 391.3
2185 Male, age 76, both hemispheres 388.5
2000 Male, age 74, unknown 366.9
2844 Male, age 55, unknown 297.3
2797 Male, age 61, both hemispheres 257.8
Gigantocellular reticular nuclei, medullary
nTPM: 335.3
2314 Male, age 61, both hemispheres 390.8
2310 Male, age 80, both hemispheres 380.6
2462 Male, age 74, both hemispheres 364.0
2022 Male, age 76, right hemisphere 311.5
1876 Female, age 85, both hemispheres 287.4
2387 Female, age 91, both hemispheres 277.8
Gigantocellular reticular nuclei, pars
nTPM: 344.1
2330 Male, age 80, both hemispheres 384.3
2706 Male, age 80, both hemispheres 373.4
2336 Male, age 61, both hemispheres 337.2
2084 Female, age 85, both hemispheres 336.3
2168 Male, age 76, both hemispheres 289.4
Inferior olive
nTPM: 432.3
2628 Female, age 91, both hemispheres 472.6
2178 Male, age 61, both hemispheres 471.9
2563 Male, age 74, both hemispheres 416.9
2379 Male, age 80, both hemispheres 404.7
2085 Female, age 85, both hemispheres 395.4
Lateral medullary reticular nucleus
nTPM: 488.5
2305 Male, age 74, both hemispheres 625.2
2374 Male, age 61, both hemispheres 532.2
2852 Male, age 80, both hemispheres 504.2
2190 Female, age 85, both hemispheres 473.4
2804 Female, age 91, both hemispheres 434.3
2044 Male, age 76, both hemispheres 361.5
Medial vestibular nucleus
nTPM: 372.4
2624 Male, age 61, both hemispheres 524.2
2801 Male, age 74, both hemispheres 403.1
2743 Female, age 85, both hemispheres 358.7
2134 Male, age 76, both hemispheres 353.0
2093 Male, age 80, both hemispheres 308.1
2803 Female, age 91, both hemispheres 287.6
Motor hypoglossal nucleus
nTPM: 395.6
2182 Male, age 80, both hemispheres 489.4
2132 Female, age 85, both hemispheres 446.9
2461 Male, age 61, both hemispheres 393.3
2277 Male, age 76, both hemispheres 388.5
2125 Female, age 91, both hemispheres 260.1
Nucleus ambiguus
nTPM: 436.2
2071 Male, age 76, both hemispheres 448.2
2096 Female, age 85, both hemispheres 424.1
Nucleus cuneatus
nTPM: 430.9
2808 Female, age 85, both hemispheres 663.3
2564 Male, age 74, both hemispheres 476.0
2380 Male, age 80, both hemispheres 417.8
2100 Male, age 76, both hemispheres 348.5
2562 Male, age 61, both hemispheres 348.5
2805 Female, age 91, both hemispheres 331.1
Nucleus gracilis
nTPM: 571.5
2299 Female, age 85, both hemispheres 715.9
2627 Male, age 74, both hemispheres 576.3
2382 Male, age 80, both hemispheres 422.2
Nucleus raphe magnus
nTPM: 325.3
2051 Male, age 76, both hemispheres 364.5
2455 Male, age 74, both hemispheres 336.9
2172 Female, age 85, both hemispheres 319.0
2459 Female, age 91, both hemispheres 318.9
2160 Male, age 61, both hemispheres 311.5
2328 Male, age 80, both hemispheres 301.0
Nucleus raphe obscurus
nTPM: 431.0
2142 Male, age 76, midline 441.0
2845 Female, age 85, midline 434.5
2800 Male, age 61, midline 417.4
Nucleus raphe pallidus
nTPM: 598.7
1924 Male, age 61, midline 933.1
2145 Male, age 76, midline 448.1
2183 Male, age 80, midline 414.8
Nucleus tractus solitarii
nTPM: 468.6
2191 Female, age 85, both hemispheres 733.6
2307 Male, age 80, both hemispheres 450.6
2656 Male, age 76, both hemispheres 351.7
2144 Female, age 91, right hemisphere 338.7
Parvicellular reticular nuclei
nTPM: 340.9
2119 Male, age 80, both hemispheres 362.3
2095 Male, age 76, both hemispheres 343.2
2558 Male, age 74, both hemispheres 317.2
Parvicellular reticular nuclei, medullary
nTPM: 364.5
2091 Female, age 85, both hemispheres 438.7
2181 Male, age 80, left hemisphere 328.1
2189 Female, age 91, both hemispheres 326.8
Peritrigeminal nucleus
nTPM: 534.0
2067 Female, age 85, both hemispheres 666.7
2179 Male, age 61, both hemispheres 505.7
2136 Male, age 76, both hemispheres 429.6
Prepositus hypoglossal nucleus
nTPM: 396.0
2086 Male, age 80, both hemispheres 445.7
2855 Female, age 85, right hemisphere 346.2
Spinal trigeminal nucleus, caudal
nTPM: 478.3
2312 Male, age 61, both hemispheres 651.1
2642 Male, age 74, both hemispheres 626.0
2308 Male, age 80, both hemispheres 441.0
2447 Male, age 76, both hemispheres 339.2
2390 Female, age 91, both hemispheres 334.4
Spinal trigeminal nucleus, interpolar
nTPM: 402.7
2386 Female, age 85, both hemispheres 506.6
2033 Male, age 80, both hemispheres 407.1
2625 Male, age 61, both hemispheres 383.0
2389 Female, age 91, both hemispheres 381.6
2066 Male, age 76, right hemisphere 335.3
Spinal vestibular nucleus
nTPM: 353.8
2796 Male, age 61, both hemispheres 451.9
2780 Male, age 80, both hemispheres 370.9
2806 Female, age 85, both hemispheres 369.0
2384 Male, age 74, both hemispheres 327.0
2748 Male, age 76, both hemispheres 313.8
2186 Female, age 91, both hemispheres 290.0
Ventral medullary reticular nucleus
nTPM: 332.1
2372 Male, age 61, both hemispheres 343.6
2060 Male, age 76, both hemispheres 320.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 458.3
2118 Male, age 80, both hemispheres 495.9
2741 Female, age 85, both hemispheres 474.3
2302 Female, age 91, both hemispheres 473.7
2180 Male, age 61, both hemispheres 473.2
1986 Male, age 76, both hemispheres 374.1

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1926.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1926.0
FF:10155-103A2 76 years, female 2354.1
FF:10038-101F2 18-64 years, mixed 2121.8
FF:10174-103C3 60 years, female 1302.1

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 333.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 333.7
Samples: 4

Max nTPM: 431.5
Min nTPM: 268.0
Sample A Female 268.2
Sample B Female 268.0
Sample C Male 367.0
Sample D Male 431.5

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
67979029 Antisense, RP_040923_02_A10, Mouse strain C57BL/6J (56 days, male) 0.6

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