HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:97.2 nTPM
HPA:97.2 nTPM
GTEx:93.6 nTPM
FANTOM5:83.3 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:70.9 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053986
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.2
Sample id Sample description nTPM
Hippocampus
nTPM: 97.2
1898 Male, age 80, left hemisphere 103.6
1855 Male, age 76, left hemisphere 100.4
2529 Female, age 94, left hemisphere 96.8
1911 Female, age 85, right hemisphere 95.2
2621 Female, age 67, right hemisphere 94.7
2148 Female, age 91, left hemisphere 92.7
Dentate gyrus
nTPM: 94.5
2010 Male, age 76, both hemispheres 101.7
2530 Female, age 94, left hemisphere 101.7
2528 Male, age 74, both hemispheres 94.5
2246 Female, age 85, both hemispheres 92.0
1927 Female, age 91, both hemispheres 90.5
2531 Female, age 67, both hemispheres 86.3
Entorhinal gyrus
nTPM: 94.5
2117 Female, age 91, right hemisphere 100.9
2764 Male, age 80, right hemisphere 96.3
1938 Female, age 85, left hemisphere 95.4
1787 Male, age 76, left hemisphere 93.4
2686 Male, age 75, right hemisphere 91.5
2613 Female, age 94, left hemisphere 89.7
Hippocampus, CA1
nTPM: 97.2
2749 Male, age 80, left hemisphere 104.8
1873 Female, age 85, both hemispheres 97.7
2527 Male, age 74, both hemispheres 96.4
2045 Male, age 76, both hemispheres 95.3
2082 Female, age 91, right hemisphere 92.0
Hippocampus, CA2
nTPM: 97.0
1963 Male, age 80, left hemisphere 100.9
2249 Male, age 74, both hemispheres 99.4
1892 Male, age 76, both hemispheres 98.4
2437 Female, age 94, left hemisphere 95.0
1940 Female, age 85, left hemisphere 94.3
2113 Female, age 91, right hemisphere 93.8
Hippocampus, CA3
nTPM: 93.7
1867 Male, age 76, both hemispheres 99.4
1891 Female, age 85, both hemispheres 97.3
2137 Male, age 80, left hemisphere 96.7
2436 Male, age 74, both hemispheres 92.7
2620 Female, age 94, left hemisphere 88.5
2861 Female, age 67, both hemispheres 87.7
Parahippocampal cortex
nTPM: 93.5
1850 Male, age 80, both hemispheres 98.2
2018 Male, age 76, both hemispheres 97.3
2245 Female, age 91, both hemispheres 97.1
2250 Female, age 67, right hemisphere 94.4
1933 Female, age 85, both hemispheres 93.4
2532 Female, age 72, left hemisphere 92.8
1990 Female, age 91, right hemisphere 92.6
2692 Male, age 74, both hemispheres 92.6
2693 Female, age 94, both hemispheres 88.7
2622 Female, age 67, right hemisphere 87.8
Perirhinal gyrus
nTPM: 93.9
1794 Male, age 80, right hemisphere 96.7
1841 Female, age 85, right hemisphere 95.8
1847 Female, age 91, left hemisphere 95.0
2521 Female, age 94, right hemisphere 91.9
2848 Male, age 76, right hemisphere 90.0
Subiculum
nTPM: 96.6
2042 Male, age 76, both hemispheres 100.9
1901 Male, age 80, both hemispheres 100.4
1977 Female, age 85, both hemispheres 95.6
2619 Male, age 74, both hemispheres 95.6
2729 Female, age 91, right hemisphere 93.6
2438 Female, age 94, left hemisphere 93.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.6
Samples: 197

Max nTPM: 131.1
Min nTPM: 56.2
Std nTPM: 13.1
Median nTPM: 93.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 131.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 126.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 125.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 123.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 121.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 121.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 121.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 118.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 118.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 117.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 116.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.3
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 82.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 44.7
Min nTPM: 25.0
Sample A Female 44.7
Sample B Female 32.1
Sample C Male 31.7
Sample D Male 25.0
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 30.4
Min nTPM: 24.7
Sample A Female 29.5
Sample B Female 30.4
Sample C Male 26.5
Sample D Male 24.7
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.5
Sample A Female 38.3
Sample B Female 25.7
Sample C Male 24.4
Sample D Male 23.5
Ventral hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 34.1
Min nTPM: 23.1
Sample A Female 34.1
Sample B Female 23.1
Sample C Male 33.4
Sample D Male 33.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 71.6
Min nTPM: 64.6
Sample A Male 65.8
Sample B Male 71.6
Sample C Female 69.4
Sample D Female 64.6
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 74.0
Min nTPM: 66.3
Sample A Male 72.6
Sample B Male 66.3
Sample C Female 74.0
Sample D Female 70.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
70429112 Antisense, RP_050614_01_A05, Mouse strain C57BL/6J (56 days, male) 5.8

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