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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:514.2 nTPM
FANTOM5:428.3 Scaled Tags Per Million
Pig:144.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001762Antibody CAB000080Antibody CAB058687
Glial cells MediumMediumMedium
Neuronal cells LowNot detectedLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 514.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 514.2
Samples: 246

Max nTPM: 4760.9
Min nTPM: 86.3
Std nTPM: 380.1
Median nTPM: 432.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4760.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1736.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1722.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1678.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1443.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1400.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1386.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1267.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1174.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1161.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1118.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1056.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1045.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 931.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 887.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 878.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 874.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 861.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 859.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 852.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 850.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 848.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 839.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 835.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 817.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 814.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 803.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 791.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 788.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 786.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 785.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 778.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 766.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 738.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 726.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 718.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 714.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 700.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 690.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 687.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 684.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 677.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 674.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 652.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 651.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 650.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 648.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 643.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 642.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 640.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 640.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 633.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 632.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 628.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 626.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 626.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 624.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 621.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 615.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 615.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 614.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 612.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 593.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 588.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 584.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 583.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 583.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 581.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 579.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 579.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 578.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 573.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 573.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 571.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 571.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 568.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 557.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 551.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 547.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 544.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 542.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 542.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 539.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 532.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 530.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 530.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 529.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 529.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 525.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 523.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 521.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 510.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 510.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 508.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 507.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 501.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 499.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 496.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 495.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 492.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 490.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 484.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 479.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 478.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 473.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 469.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 469.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 463.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 463.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 459.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 454.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 454.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 454.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 453.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 449.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 447.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 447.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 444.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 441.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 440.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 440.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 438.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 434.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 431.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 427.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 427.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 423.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 423.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 422.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 415.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 411.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 411.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 407.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 406.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 405.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 401.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 400.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 399.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 398.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 398.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 397.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 396.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 394.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 393.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 393.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 387.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 386.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 382.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 381.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 380.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 378.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 378.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 376.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 375.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 372.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 372.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 370.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 370.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 362.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 361.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 360.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 359.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 359.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 358.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 356.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 354.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 354.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 353.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 352.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 351.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 351.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 347.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 341.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 339.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 339.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 335.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 334.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 333.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 332.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 328.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 327.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 327.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 323.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 321.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 320.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 317.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 317.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 315.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 313.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 313.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 310.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 309.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 307.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 304.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 302.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 301.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 301.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 298.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 297.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 297.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 295.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 292.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 290.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 285.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 282.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 279.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 279.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 279.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 279.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 278.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 277.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 274.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 273.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 270.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 269.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 265.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 264.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 262.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 260.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 254.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 251.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 245.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 245.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 236.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 235.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 234.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 233.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 232.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 230.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 225.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 222.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 221.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 221.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 220.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 212.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 211.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 210.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 201.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 194.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 194.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 190.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 175.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 172.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 104.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 86.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 428.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 428.3
FF:10164-103B2 76 years, female 428.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 144.9
Pig sample Sample description nTPM
Caudate
nTPM: 144.9
Samples: 4

Max nTPM: 179.5
Min nTPM: 106.3
Sample A Female 126.9
Sample B Female 166.9
Sample C Male 179.5
Sample D Male 106.3

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