PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:667.4 nTPM
HPA:667.4 nTPM
FANTOM5:734.1 Scaled Tags Per Million
Pig:132.1 nTPM
Mouse:39.6 nTPM
Allen mouse:2.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 667.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 287.3
2090 Male, age 80, both hemispheres 313.1
1984 Male, age 76, both hemispheres 290.4
2188 Female, age 91, both hemispheres 277.7
2301 Female, age 85, both hemispheres 267.8
Area postrema
nTPM: 667.4
2799 Male, age 61, both hemispheres 1156.6
2054 Male, age 76, both hemispheres 423.3
2306 Male, age 80, both hemispheres 422.2
Cuneate nuclei
nTPM: 304.0
2376 Male, age 61, both hemispheres 324.7
2381 Male, age 80, both hemispheres 299.8
2131 Male, age 76, both hemispheres 287.6
Dorsal cochlear nucleus
nTPM: 298.0
2378 Male, age 80, both hemispheres 323.7
2370 Male, age 61, both hemispheres 301.0
2058 Male, age 76, both hemispheres 292.4
2802 Male, age 74, right hemisphere 292.2
2187 Female, age 91, both hemispheres 281.0
Dorsal medullary reticular nucleus
nTPM: 283.8
2373 Male, age 61, both hemispheres 298.1
2088 Male, age 76, both hemispheres 288.3
2040 Female, age 85, both hemispheres 265.2
Dorsal motor vagal complex
nTPM: 337.5
2797 Male, age 61, both hemispheres 414.5
2185 Male, age 76, both hemispheres 410.1
2813 Female, age 72, unknown 361.9
2807 Female, age 85, both hemispheres 316.5
2643 Male, age 74, both hemispheres 316.0
2000 Male, age 74, unknown 307.8
2844 Male, age 55, unknown 293.9
2133 Female, age 91, both hemispheres 279.0
Dorsal tegmental nucleus
nTPM: 298.9
2358 Male, age 61, both hemispheres 346.6
1936 Male, age 76, left hemisphere 288.4
2326 Male, age 74, both hemispheres 281.1
2083 Male, age 80, both hemispheres 279.5
Dorsolateral tegmental area
nTPM: 347.2
2337 Male, age 61, both hemispheres 559.8
2360 Male, age 74, both hemispheres 319.5
2141 Male, age 76, both hemispheres 297.5
2654 Male, age 80, both hemispheres 284.8
2751 Female, age 85, both hemispheres 274.4
Gigantocellular reticular nuclei, medullary
nTPM: 286.8
2314 Male, age 61, both hemispheres 332.6
2462 Male, age 74, both hemispheres 291.6
2310 Male, age 80, both hemispheres 287.0
2387 Female, age 91, both hemispheres 272.1
2022 Male, age 76, right hemisphere 268.9
1876 Female, age 85, both hemispheres 268.7
Gigantocellular reticular nuclei, pars
nTPM: 285.2
2330 Male, age 80, both hemispheres 305.0
2706 Male, age 80, both hemispheres 303.4
2336 Male, age 61, both hemispheres 290.8
2168 Male, age 76, both hemispheres 264.4
2084 Female, age 85, both hemispheres 262.3
Inferior olive
nTPM: 318.8
2379 Male, age 80, both hemispheres 347.6
2178 Male, age 61, both hemispheres 342.6
2085 Female, age 85, both hemispheres 307.5
2628 Female, age 91, both hemispheres 300.7
2563 Male, age 74, both hemispheres 295.2
Kolliker-Fuse nucleus
nTPM: 315.8
2315 Male, age 76, right hemisphere 393.5
2793 Female, age 91, left hemisphere 279.8
2163 Male, age 80, both hemispheres 274.2
Lateral lemniscal nuclei
nTPM: 286.8
2746 Female, age 85, left hemisphere 367.2
2453 Male, age 74, right hemisphere 273.6
2036 Male, age 80, both hemispheres 267.3
2320 Female, age 91, left hemisphere 264.5
2169 Male, age 76, both hemispheres 261.4
Lateral medullary reticular nucleus
nTPM: 331.7
2852 Male, age 80, both hemispheres 388.4
2305 Male, age 74, both hemispheres 356.7
2374 Male, age 61, both hemispheres 343.0
2190 Female, age 85, both hemispheres 324.6
2044 Male, age 76, both hemispheres 293.7
2804 Female, age 91, both hemispheres 283.8
Lateral parabrachial nucleus
nTPM: 300.5
2792 Male, age 76, both hemispheres 337.7
2013 Male, age 80, both hemispheres 301.7
2790 Male, age 61, both hemispheres 281.9
2139 Female, age 85, right hemisphere 280.5
Lateral vestibular nucleus
nTPM: 289.4
2311 Male, age 80, both hemispheres 307.5
2184 Male, age 76, both hemispheres 271.3
Locus coeruleus
nTPM: 264.5
1980 Male, age 76, both hemispheres 280.6
2123 Female, age 91, both hemispheres 271.1
2720 Male, age 74, both hemispheres 268.8
2162 Male, age 80, both hemispheres 260.5
2317 Female, age 72, unknown 259.3
2014 Male, age 55, unknown 256.5
2788 Male, age 74, unknown 254.5
Medial olivary nucleus
nTPM: 443.7
1962 Male, age 76, both hemispheres 645.6
1943 Male, age 61, both hemispheres 432.0
2851 Male, age 80, both hemispheres 403.8
2138 Female, age 91, both hemispheres 293.2
Medial parabrachial nucleus
nTPM: 282.3
2854 Male, age 80, both hemispheres 294.3
2170 Female, age 91, both hemispheres 292.7
2786 Male, age 76, both hemispheres 280.5
2156 Male, age 61, both hemispheres 273.3
2463 Female, age 85, right hemisphere 270.9
Medial periolivary nuclei
nTPM: 290.6
2081 Male, age 80, both hemispheres 335.9
2063 Male, age 76, both hemispheres 295.6
2791 Male, age 74, right hemisphere 285.0
2458 Female, age 91, both hemispheres 272.4
2171 Female, age 85, both hemispheres 263.9
Medial vestibular nucleus
nTPM: 297.4
2624 Male, age 61, both hemispheres 341.9
2743 Female, age 85, both hemispheres 331.7
2134 Male, age 76, both hemispheres 293.9
2093 Male, age 80, both hemispheres 278.2
2801 Male, age 74, both hemispheres 274.1
2803 Female, age 91, both hemispheres 264.8
Motor facial nucleus
nTPM: 280.5
2126 Male, age 61, both hemispheres 300.2
2697 Female, age 85, both hemispheres 285.8
2795 Female, age 91, both hemispheres 283.8
2365 Male, age 74, right hemisphere 279.2
2327 Male, age 80, both hemispheres 267.9
2062 Male, age 76, both hemispheres 265.9
Motor hypoglossal nucleus
nTPM: 311.8
2277 Male, age 76, both hemispheres 351.0
2182 Male, age 80, both hemispheres 342.2
2461 Male, age 61, both hemispheres 323.6
2125 Female, age 91, both hemispheres 274.6
2132 Female, age 85, both hemispheres 267.7
Motor trigeminal nucleus
nTPM: 285.1
2335 Male, age 61, both hemispheres 310.8
2079 Male, age 80, both hemispheres 297.6
2321 Female, age 91, both hemispheres 276.6
2560 Male, age 74, both hemispheres 271.4
2309 Male, age 76, both hemispheres 269.1
Nuclei of the trapezoid body
nTPM: 274.1
1983 Male, age 76, both hemispheres 288.3
2166 Male, age 80, both hemispheres 278.7
2368 Female, age 91, both hemispheres 268.7
2159 Male, age 61, both hemispheres 267.8
2735 Female, age 85, both hemispheres 266.9
Nucleus ambiguus
nTPM: 308.4
2071 Male, age 76, both hemispheres 345.9
2096 Female, age 85, both hemispheres 271.0
Nucleus cuneatus
nTPM: 364.4
2808 Female, age 85, both hemispheres 581.3
2380 Male, age 80, both hemispheres 376.3
2562 Male, age 61, both hemispheres 342.1
2564 Male, age 74, both hemispheres 311.4
2100 Male, age 76, both hemispheres 296.9
2805 Female, age 91, both hemispheres 278.6
Nucleus gracilis
nTPM: 362.4
2299 Female, age 85, both hemispheres 396.1
2382 Male, age 80, both hemispheres 347.9
2627 Male, age 74, both hemispheres 343.2
Nucleus raphe magnus
nTPM: 298.3
2051 Male, age 76, both hemispheres 452.9
2455 Male, age 74, both hemispheres 277.6
2459 Female, age 91, both hemispheres 272.7
2328 Male, age 80, both hemispheres 272.6
2172 Female, age 85, both hemispheres 259.3
2160 Male, age 61, both hemispheres 254.7
Nucleus raphe obscurus
nTPM: 391.1
2142 Male, age 76, midline 519.5
2800 Male, age 61, midline 346.4
2845 Female, age 85, midline 307.4
Nucleus raphe pallidus
nTPM: 541.7
1924 Male, age 61, midline 729.1
2145 Male, age 76, midline 556.0
2183 Male, age 80, midline 339.9
Nucleus tractus solitarii
nTPM: 333.5
2191 Female, age 85, both hemispheres 370.7
2307 Male, age 80, both hemispheres 359.8
2144 Female, age 91, right hemisphere 304.2
2656 Male, age 76, both hemispheres 299.4
Paramedian reticular nucleus
nTPM: 291.7
2052 Male, age 76, both hemispheres 323.9
2057 Male, age 80, both hemispheres 298.4
2313 Male, age 61, both hemispheres 279.8
2050 Female, age 85, both hemispheres 264.6
Parvicellular reticular nuclei
nTPM: 296.5
2119 Male, age 80, both hemispheres 315.9
2095 Male, age 76, both hemispheres 295.8
2558 Male, age 74, both hemispheres 277.9
Parvicellular reticular nuclei, medullary
nTPM: 269.6
2181 Male, age 80, left hemisphere 269.9
2091 Female, age 85, both hemispheres 269.6
2189 Female, age 91, both hemispheres 269.2
Peritrigeminal nucleus
nTPM: 335.1
2179 Male, age 61, both hemispheres 339.1
2136 Male, age 76, both hemispheres 336.5
2067 Female, age 85, both hemispheres 329.8
Pontine nuclei
nTPM: 287.4
2115 Male, age 80, left hemisphere 363.8
1968 Male, age 76, left hemisphere 290.7
2319 Female, age 91, both hemispheres 286.1
1863 Male, age 55, unknown 274.9
2787 Female, age 85, both hemispheres 274.4
2109 Female, age 72, unknown 271.6
2454 Male, age 74, left hemisphere 269.6
2727 Male, age 61, right hemisphere 268.4
Pontine raphe nucleus
nTPM: 266.1
2853 Male, age 76, midline 270.2
2122 Female, age 85, midline 262.0
Posteroventral cochlear nucleus
nTPM: 287.4
2341 Male, age 80, both hemispheres 304.6
2070 Male, age 76, both hemispheres 297.1
2371 Male, age 61, both hemispheres 292.5
2135 Female, age 91, both hemispheres 287.8
2752 Female, age 85, both hemispheres 255.2
Prepositus hypoglossal nucleus
nTPM: 318.1
2086 Male, age 80, both hemispheres 343.8
2855 Female, age 85, right hemisphere 292.3
Principal sensory trigeminal nucleus
nTPM: 267.6
2367 Female, age 91, left hemisphere 274.6
2324 Male, age 76, both hemispheres 267.5
2008 Male, age 80, left hemisphere 264.6
2158 Male, age 61, both hemispheres 263.5
Reticular pontine nucleus, caudal
nTPM: 280.4
2092 Male, age 76, both hemispheres 305.6
2559 Male, age 74, both hemispheres 275.8
2332 Male, age 80, right hemisphere 273.2
2457 Female, age 91, both hemispheres 267.0
Reticular pontine nucleus, oral
nTPM: 272.2
1939 Male, age 80, both hemispheres 277.6
2366 Female, age 91, both hemispheres 275.4
2361 Male, age 74, both hemispheres 272.2
2167 Male, age 76, both hemispheres 271.9
2012 Female, age 85, both hemispheres 263.9
Reticulotegmental nucleus
nTPM: 279.3
2333 Male, age 80, both hemispheres 286.6
2452 Male, age 74, both hemispheres 283.0
2322 Female, age 91, both hemispheres 274.8
2325 Male, age 76, both hemispheres 272.9
Spinal trigeminal nucleus, caudal
nTPM: 293.9
2308 Male, age 80, both hemispheres 324.0
2312 Male, age 61, both hemispheres 321.9
2447 Male, age 76, both hemispheres 284.4
2642 Male, age 74, both hemispheres 272.3
2390 Female, age 91, both hemispheres 267.1
Spinal trigeminal nucleus, interpolar
nTPM: 278.4
2033 Male, age 80, both hemispheres 303.3
2066 Male, age 76, right hemisphere 289.2
2625 Male, age 61, both hemispheres 277.2
2386 Female, age 85, both hemispheres 261.4
2389 Female, age 91, both hemispheres 261.1
Spinal trigeminal nucleus, oral
nTPM: 279.1
2164 Male, age 80, both hemispheres 288.8
1978 Male, age 76, both hemispheres 288.3
2737 Female, age 85, both hemispheres 260.4
Spinal vestibular nucleus
nTPM: 281.4
2796 Male, age 61, both hemispheres 304.8
2780 Male, age 80, both hemispheres 297.7
2748 Male, age 76, both hemispheres 285.8
2384 Male, age 74, both hemispheres 273.2
2806 Female, age 85, both hemispheres 264.0
2186 Female, age 91, both hemispheres 262.7
Subcoeruleus area
nTPM: 271.4
2369 Female, age 85, left hemisphere 274.9
2089 Male, age 76, left hemisphere 274.3
2451 Male, age 74, both hemispheres 272.9
1958 Male, age 80, both hemispheres 269.1
2323 Female, age 91, left hemisphere 265.8
Superior olive
nTPM: 278.5
2364 Male, age 74, right hemisphere 290.1
2020 Male, age 76, both hemispheres 282.1
2561 Female, age 91, both hemispheres 277.7
2329 Male, age 80, right hemisphere 277.2
1875 Female, age 85, both hemispheres 265.4
Superior vestibular nucleus
nTPM: 308.3
2015 Male, age 80, both hemispheres 313.7
2383 Male, age 74, both hemispheres 309.3
2061 Male, age 76, both hemispheres 301.9
Ventral medullary reticular nucleus
nTPM: 290.6
2372 Male, age 61, both hemispheres 302.8
2060 Male, age 76, both hemispheres 278.4
Ventral periolivary nuclei
nTPM: 273.4
2023 Male, age 76, both hemispheres 286.4
2165 Male, age 80, both hemispheres 275.1
2794 Female, age 91, left hemisphere 271.2
2130 Female, age 85, both hemispheres 260.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 321.9
1986 Male, age 76, both hemispheres 370.2
2180 Male, age 61, both hemispheres 329.3
2118 Male, age 80, both hemispheres 325.5
2741 Female, age 85, both hemispheres 299.2
2302 Female, age 91, both hemispheres 285.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 296.1
2840 Female, age 85, both hemispheres 334.6
2161 Male, age 80, both hemispheres 310.6
2359 Male, age 61, both hemispheres 294.6
1959 Male, age 76, both hemispheres 289.8
2456 Female, age 91, both hemispheres 275.4
2449 Male, age 74, both hemispheres 271.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 734.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 172.8
FF:10165-103B3 76 years, female 180.7
FF:10182-103D2 60 years, female 165.0
Medulla oblongata
Scaled Tags Per Million: 734.1
FF:10174-103C3 60 years, female 870.2
FF:10155-103A2 76 years, female 704.9
FF:10038-101F2 18-64 years, mixed 627.2
Pons
Scaled Tags Per Million: 179.2
FF:10033-101E6 18-54 years, mixed 179.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 132.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 132.1
Samples: 4

Max nTPM: 226.2
Min nTPM: 75.9
Sample A Female 75.9
Sample B Female 104.3
Sample C Male 122.1
Sample D Male 226.2
Pons
nTPM: 118.2
Samples: 4

Max nTPM: 224.1
Min nTPM: 63.3
Sample A Female 224.1
Sample B Female 63.3
Sample C Male 107.0
Sample D Male 78.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 39.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 39.6
Samples: 4

Max nTPM: 43.3
Min nTPM: 33.6
Sample A Male 43.3
Sample B Male 33.6
Sample C Female 39.3
Sample D Female 42.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
79677375 Antisense, RP_071218_02_C11, Mouse strain C57BL/6J (56 days, male) 2.6
79677371 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 1.8
1310 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 1.2
79907904 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 1.2
1309 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 2.0
79677375 Antisense, RP_071218_02_C11, Mouse strain C57BL/6J (56 days, male) 2.4
79677371 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 2.2
1310 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 1.5
79907904 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 1.2
1309 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 0.3

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