HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:39.6 nTPM
FANTOM5:146.0 Scaled Tags Per Million
Pig:52.8 nTPM
Mouse:58.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019669Antibody HPA024235Antibody HPA024691Antibody CAB004549
Glial cells HighNot detectedLowNot detected
Neuronal cells HighMediumMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.1
2529 Female, age 94, left hemisphere 41.0
1898 Male, age 80, left hemisphere 37.4
2148 Female, age 91, left hemisphere 36.8
1911 Female, age 85, right hemisphere 36.7
2621 Female, age 67, right hemisphere 35.4
1855 Male, age 76, left hemisphere 35.2
Dentate gyrus
nTPM: 37.1
2530 Female, age 94, left hemisphere 43.3
1927 Female, age 91, both hemispheres 37.8
2246 Female, age 85, both hemispheres 37.5
2010 Male, age 76, both hemispheres 35.5
2531 Female, age 67, both hemispheres 35.5
2528 Male, age 74, both hemispheres 33.0
Entorhinal gyrus
nTPM: 36.6
2686 Male, age 75, right hemisphere 40.2
2764 Male, age 80, right hemisphere 37.3
2117 Female, age 91, right hemisphere 37.0
1938 Female, age 85, left hemisphere 36.1
1787 Male, age 76, left hemisphere 36.0
2613 Female, age 94, left hemisphere 33.0
Hippocampus, CA1
nTPM: 37.7
2749 Male, age 80, left hemisphere 46.3
1873 Female, age 85, both hemispheres 39.6
2527 Male, age 74, both hemispheres 36.9
2045 Male, age 76, both hemispheres 35.0
2082 Female, age 91, right hemisphere 30.7
Hippocampus, CA2
nTPM: 37.3
1892 Male, age 76, both hemispheres 44.0
1963 Male, age 80, left hemisphere 40.7
1940 Female, age 85, left hemisphere 38.8
2437 Female, age 94, left hemisphere 35.8
2113 Female, age 91, right hemisphere 34.4
2249 Male, age 74, both hemispheres 30.4
Hippocampus, CA3
nTPM: 36.2
2137 Male, age 80, left hemisphere 43.3
1891 Female, age 85, both hemispheres 38.9
1867 Male, age 76, both hemispheres 36.9
2620 Female, age 94, left hemisphere 36.8
2861 Female, age 67, both hemispheres 32.7
2436 Male, age 74, both hemispheres 28.7
Parahippocampal cortex
nTPM: 37.9
1850 Male, age 80, both hemispheres 42.6
2532 Female, age 72, left hemisphere 42.6
2692 Male, age 74, both hemispheres 41.3
1990 Female, age 91, right hemisphere 37.7
2245 Female, age 91, both hemispheres 37.7
2693 Female, age 94, both hemispheres 37.5
2018 Male, age 76, both hemispheres 36.7
1933 Female, age 85, both hemispheres 35.4
2622 Female, age 67, right hemisphere 34.4
2250 Female, age 67, right hemisphere 33.1
Perirhinal gyrus
nTPM: 37.3
2848 Male, age 76, right hemisphere 38.7
1794 Male, age 80, right hemisphere 38.0
1841 Female, age 85, right hemisphere 37.8
1847 Female, age 91, left hemisphere 36.8
2521 Female, age 94, right hemisphere 35.2
Subiculum
nTPM: 37.2
2438 Female, age 94, left hemisphere 40.4
1901 Male, age 80, both hemispheres 40.1
2619 Male, age 74, both hemispheres 38.5
2042 Male, age 76, both hemispheres 36.0
1977 Female, age 85, both hemispheres 34.8
2729 Female, age 91, right hemisphere 33.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.6
Samples: 197

Max nTPM: 83.9
Min nTPM: 22.5
Std nTPM: 9.6
Median nTPM: 37.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 83.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 81.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 80.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 69.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 65.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 60.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 59.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 59.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 58.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 57.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.0
FF:10169-103B7 60 years, female 167.4
FF:10153-102I9 76 years, female 124.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.9
Samples: 4

Max nTPM: 61.6
Min nTPM: 41.9
Sample A Female 61.6
Sample B Female 49.4
Sample C Male 58.5
Sample D Male 41.9
Entorhinal cortex
nTPM: 50.7
Samples: 4

Max nTPM: 53.4
Min nTPM: 48.1
Sample A Female 48.1
Sample B Female 53.4
Sample C Male 52.8
Sample D Male 48.6
Subiculum
nTPM: 52.8
Samples: 4

Max nTPM: 65.5
Min nTPM: 48.0
Sample A Female 65.5
Sample B Female 48.0
Sample C Male 48.7
Sample D Male 48.9
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 54.7
Min nTPM: 39.4
Sample A Female 49.5
Sample B Female 39.4
Sample C Male 46.7
Sample D Male 54.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 53.0
Sample A Male 53.0
Sample B Male 59.0
Sample C Female 56.2
Sample D Female 65.9
Hippocampal formation
nTPM: 54.7
Samples: 4

Max nTPM: 57.7
Min nTPM: 49.1
Sample A Male 55.1
Sample B Male 57.7
Sample C Female 57.0
Sample D Female 49.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70812877 Antisense, RP_050712_02_G09, Mouse strain C57BL/6J (56 days, male) 2.0
71920504 Antisense, RP_050915_02_C01, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

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