HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.9 nTPM
HPA:81.9 nTPM
GTEx:83.6 nTPM
FANTOM5:287.3 Scaled Tags Per Million
Pig:68.2 nTPM
Mouse:159.6 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016939Antibody HPA064668
Glial cells LowNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.9
Sample id Sample description nTPM
Hippocampus
nTPM: 72.3
1898 Male, age 80, left hemisphere 82.9
2621 Female, age 67, right hemisphere 79.9
1855 Male, age 76, left hemisphere 72.8
2529 Female, age 94, left hemisphere 68.6
2148 Female, age 91, left hemisphere 65.2
1911 Female, age 85, right hemisphere 64.0
Dentate gyrus
nTPM: 72.0
2010 Male, age 76, both hemispheres 79.0
1927 Female, age 91, both hemispheres 77.8
2530 Female, age 94, left hemisphere 73.4
2246 Female, age 85, both hemispheres 71.0
2531 Female, age 67, both hemispheres 67.6
2528 Male, age 74, both hemispheres 63.1
Entorhinal gyrus
nTPM: 73.0
2764 Male, age 80, right hemisphere 80.3
1938 Female, age 85, left hemisphere 78.9
1787 Male, age 76, left hemisphere 74.2
2613 Female, age 94, left hemisphere 70.2
2686 Male, age 75, right hemisphere 68.1
2117 Female, age 91, right hemisphere 66.4
Hippocampus, CA1
nTPM: 77.8
2749 Male, age 80, left hemisphere 106.2
1873 Female, age 85, both hemispheres 77.9
2527 Male, age 74, both hemispheres 71.9
2045 Male, age 76, both hemispheres 69.6
2082 Female, age 91, right hemisphere 63.6
Hippocampus, CA2
nTPM: 73.5
1892 Male, age 76, both hemispheres 87.0
1963 Male, age 80, left hemisphere 85.2
2437 Female, age 94, left hemisphere 69.1
2249 Male, age 74, both hemispheres 67.9
1940 Female, age 85, left hemisphere 67.7
2113 Female, age 91, right hemisphere 64.0
Hippocampus, CA3
nTPM: 74.0
2137 Male, age 80, left hemisphere 89.2
1867 Male, age 76, both hemispheres 78.5
2620 Female, age 94, left hemisphere 74.6
1891 Female, age 85, both hemispheres 68.7
2436 Male, age 74, both hemispheres 67.1
2861 Female, age 67, both hemispheres 66.1
Parahippocampal cortex
nTPM: 73.2
1850 Male, age 80, both hemispheres 84.7
1990 Female, age 91, right hemisphere 81.2
2532 Female, age 72, left hemisphere 77.0
2245 Female, age 91, both hemispheres 76.6
1933 Female, age 85, both hemispheres 73.6
2250 Female, age 67, right hemisphere 71.9
2018 Male, age 76, both hemispheres 68.5
2692 Male, age 74, both hemispheres 67.5
2622 Female, age 67, right hemisphere 66.3
2693 Female, age 94, both hemispheres 64.9
Perirhinal gyrus
nTPM: 81.9
1847 Female, age 91, left hemisphere 93.6
1794 Male, age 80, right hemisphere 86.8
1841 Female, age 85, right hemisphere 79.4
2848 Male, age 76, right hemisphere 75.4
2521 Female, age 94, right hemisphere 74.3
Subiculum
nTPM: 70.8
1901 Male, age 80, both hemispheres 79.7
1977 Female, age 85, both hemispheres 74.7
2438 Female, age 94, left hemisphere 73.7
2619 Male, age 74, both hemispheres 69.3
2042 Male, age 76, both hemispheres 68.7
2729 Female, age 91, right hemisphere 58.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.6
Samples: 197

Max nTPM: 164.6
Min nTPM: 47.4
Std nTPM: 25.4
Median nTPM: 76.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 164.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 153.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 149.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 147.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 141.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 141.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 139.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 138.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 133.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 133.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 131.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 287.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 287.3
FF:10169-103B7 60 years, female 380.8
FF:10153-102I9 76 years, female 193.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.2
Samples: 4

Max nTPM: 86.8
Min nTPM: 57.9
Sample A Female 86.8
Sample B Female 70.0
Sample C Male 57.9
Sample D Male 58.1
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 69.4
Min nTPM: 53.9
Sample A Female 69.4
Sample B Female 68.0
Sample C Male 57.8
Sample D Male 53.9
Subiculum
nTPM: 56.6
Samples: 4

Max nTPM: 74.4
Min nTPM: 49.0
Sample A Female 74.4
Sample B Female 51.0
Sample C Male 49.0
Sample D Male 52.0
Ventral hippocampus
nTPM: 59.4
Samples: 4

Max nTPM: 67.3
Min nTPM: 39.6
Sample A Female 66.8
Sample B Female 39.6
Sample C Male 67.3
Sample D Male 63.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 159.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 159.6
Samples: 4

Max nTPM: 174.2
Min nTPM: 145.5
Sample A Male 145.5
Sample B Male 174.2
Sample C Female 159.2
Sample D Female 159.4
Hippocampal formation
nTPM: 155.3
Samples: 4

Max nTPM: 167.0
Min nTPM: 141.4
Sample A Male 167.0
Sample B Male 155.5
Sample C Female 141.4
Sample D Female 157.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
69873403 Antisense, RP_050512_01_B11, Mouse strain C57BL/6J (56 days, male) 11.8

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