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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:74.8 nTPM
FANTOM5:183.0 Scaled Tags Per Million
Pig:62.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA016939Antibody HPA064668
Glial cells MediumNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.8
Samples: 246

Max nTPM: 151.1
Min nTPM: 43.1
Std nTPM: 17.0
Median nTPM: 71.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 151.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 140.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 125.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 117.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 115.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 115.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 111.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 109.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 108.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 106.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 105.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 105.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 104.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 104.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 103.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 102.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 101.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 101.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 100.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 99.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 99.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 99.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 99.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 98.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 98.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 97.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 97.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 97.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 96.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 96.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 96.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 94.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 94.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 93.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 93.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 93.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 93.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 92.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 91.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 91.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 91.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 90.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 90.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 90.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 89.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 89.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 88.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 87.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 86.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 86.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 86.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 86.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 85.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 85.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 85.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 85.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 84.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 84.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 84.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 84.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 84.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 84.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 83.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 83.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 83.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 83.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 83.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 82.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 82.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 82.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 80.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 80.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 79.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 79.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 78.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 78.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 78.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 78.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 77.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 77.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 77.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 77.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 76.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 75.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 75.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 75.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 74.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 73.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 73.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 73.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 72.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 71.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 71.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 71.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 71.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 71.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 70.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 70.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 70.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 70.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 70.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 70.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 69.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 69.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 69.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 69.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 69.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 68.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 68.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 68.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 68.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 67.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 67.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 67.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 67.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 67.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 66.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 66.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 66.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 66.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 65.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 64.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 64.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 63.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 63.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 63.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 62.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 62.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 62.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 62.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 61.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 61.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 61.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 60.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 60.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 60.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 60.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 59.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 59.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 58.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 58.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 58.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 57.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 56.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 56.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 56.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 55.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 55.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 54.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 54.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 53.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 51.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 50.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 49.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 49.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 44.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 44.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 183.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 183.0
FF:10164-103B2 76 years, female 183.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 62.2
Pig sample Sample description nTPM
Caudate
nTPM: 62.2
Samples: 4

Max nTPM: 77.2
Min nTPM: 54.8
Sample A Female 55.0
Sample B Female 61.6
Sample C Male 77.2
Sample D Male 54.8

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