Expression of TMSB10 in testis cancer - The Human Protein Atlas

TESTIS CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TMSB10 is not prognostic in testis cancer

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1270.37

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

1841.8

Number of samples

134

Samples

Sample	Description	FPKM
TCGA-2G-AAFM-01A	31 years, male, white, stage:iia, alive, 503 days	6029.1
TCGA-ZM-AA0H-01A	50 years, male, white, stage:is, alive, 1736 days	4490.2
TCGA-ZM-AA05-01A	36 years, male, white, stage:iic, alive, 1126 days	4284.1
TCGA-ZM-AA0D-01A	34 years, male, white, stage:ia, alive, 848 days	3999.6
TCGA-YU-A90S-01A	26 years, male, white, stage:ia, alive, 971 days	3973.1
TCGA-VF-A8AE-01A	39 years, male, white, stage:ia, alive, 727 days	3969.9
TCGA-2G-AAFO-01A	33 years, male, white, stage:iia, alive, 685 days	3758.6
TCGA-ZM-AA0E-01A	39 years, male, white, stage:ia, alive, 811 days	3417.1
TCGA-VF-A8AB-01A	31 years, male, black or african american, stage:ia, alive, 760 days	3314.4
TCGA-2G-AAGF-01A	28 years, male, white, stage:is, alive, 2734 days	3286.2
TCGA-ZM-AA0F-01A	35 years, male, white, stage:ia, alive, 681 days	3156.0
TCGA-4K-AA1H-01A	26 years, male, white, stage:ia, alive, 518 days	3086.7
TCGA-XE-AAOB-01A	27 years, male, white, stage:is, dead, 513 days	3014.2
TCGA-XE-AAOJ-01A	24 years, male, white, stage:is, alive, 1550 days	3000.8
TCGA-ZM-AA0N-01A	44 years, male, white, stage:ib, alive, 634 days	2993.6
TCGA-2G-AAFL-01A	35 years, male, white, stage:ib, alive, 750 days	2983.9
TCGA-2G-AAGT-01A	30 years, male, white, stage:is, alive, 4406 days	2936.1
TCGA-2G-AAHN-01A	32 years, male, white, stage:i, alive, 6445 days	2924.6
TCGA-YU-AA4L-01A	27 years, male, black or african american, stage:iiic, alive, 1573 days	2860.7
TCGA-SN-A84X-01A	21 years, male, white, stage:is, alive, 312 days	2821.3
TCGA-2G-AAH4-01A	34 years, male, white, stage:ii, alive, 6210 days	2801.6
TCGA-XE-AAOC-01A	31 years, male, white, stage:ia, alive, 270 days	2758.0
TCGA-2G-AAG8-01A	21 years, male, white, stage:ib, alive, 2289 days	2732.6
TCGA-2G-AAGZ-01A	27 years, male, white, stage:iiia, alive, 5233 days	2730.2
TCGA-2G-AAL5-01A	31 years, male, white, stage:i, alive, 7437 days	2718.7
TCGA-4K-AA1I-01A	26 years, male, white, stage:ia, alive, 3 days	2631.4
TCGA-X3-A8G4-01A	33 years, male, white, stage:is, alive, 856 days	2577.2
TCGA-2G-AAFN-01A	26 years, male, white, stage:iiib, alive, 773 days	2470.7
TCGA-VF-A8A8-01A	18 years, male, white, stage:ia, alive, 1131 days	2394.5
TCGA-2G-AAFY-01A	24 years, male, white, stage:iia, alive, 1099 days	2344.5
TCGA-2G-AAKD-01A	18 years, male, white, stage:iii, alive, 6340 days	2340.7
TCGA-ZM-AA0B-01A	32 years, male, white, stage:ia, alive, 838 days	2339.0
TCGA-YU-AA61-01A	29 years, male, white, stage:is, alive, 864 days	2304.9
TCGA-2G-AAHC-01A	33 years, male, white, stage:is, alive, 5539 days	2281.1
TCGA-XE-AAO6-01A	47 years, male, white, stage:ia, alive, 240 days	2234.4
TCGA-2G-AAGG-01A	20 years, male, white, stage:iiic, alive, 2611 days	2231.9
TCGA-2G-AAGY-01A	28 years, male, white, stage:is, alive, 5329 days	2226.2
TCGA-2G-AALP-01A	43 years, male, white, stage:iiib, alive, 2645 days	2210.9
TCGA-2G-AAHL-01A	26 years, male, white, stage:i, alive, 7081 days	2196.4
TCGA-2G-AAHA-01A	48 years, male, white, stage:ib, alive, 3349 days	2196.0
TCGA-2G-AAFV-01A	31 years, male, white, stage:is, alive, 1389 days	2153.3
TCGA-VF-A8AD-01A	36 years, male, white, stage:ib, alive, 1006 days	2120.0
TCGA-2G-AAG5-01A	36 years, male, white, stage:is, alive, 2299 days	2038.4
TCGA-SN-A84W-01A	30 years, male, white, stage:is, alive, 293 days	1967.7
TCGA-2G-AAL7-01A	32 years, male, white, stage:is, alive, 3991 days	1964.6
TCGA-2G-AAFE-01A	37 years, male, white, stage:iia, alive, 4702 days	1958.4
TCGA-YU-A90Y-01A	23 years, male, black or african american, stage:iiic, dead, 17 days	1945.0
TCGA-XY-A8S3-01B	24 years, male, white, stage:is, alive, 843 days	1941.0
TCGA-2G-AAGP-01A	33 years, male, white, stage:iia, alive, 4018 days	1937.0
TCGA-W4-A7U3-01A	26 years, male, white, alive, 149 days	1927.0
TCGA-XE-AAOD-01A	39 years, male, white, stage:ib, alive, 2058 days	1926.1
TCGA-4K-AAAL-01A	31 years, male, white, stage:is, alive, 483 days	1924.1
TCGA-2G-AAGJ-01A	28 years, male, black or african american, stage:ia, alive, 2938 days	1903.9
TCGA-XE-A8H4-01A	23 years, male, white, stage:ia, alive, 559 days	1885.9
TCGA-VF-A8A9-01A	31 years, male, white, stage:ia, alive, 1119 days	1877.3
TCGA-YU-A94D-01A	28 years, male, stage:iiib, alive, 2167 days	1855.0
TCGA-2G-AAKL-01A	26 years, male, white, stage:ii, alive, 7023 days	1850.6
TCGA-VF-A8AC-01A	29 years, male, white, stage:ia, alive, 1083 days	1813.6
TCGA-2G-AAGK-01A	20 years, male, white, stage:is, alive, 3621 days	1801.4
TCGA-ZM-AA06-01A	45 years, male, white, stage:ib, alive, 1498 days	1790.3
TCGA-XE-AAO4-01A	40 years, male, white, stage:ia, alive, 367 days	1768.7
TCGA-2G-AAFI-01A	41 years, male, white, stage:ib, alive, 675 days	1740.1
TCGA-2X-A9D5-01A	49 years, male, white, stage:i, alive, 435 days	1700.5
TCGA-XE-AANI-01A	37 years, male, white, stage:is, alive, 1041 days	1698.7
TCGA-YU-A90P-01A	25 years, male, white, stage:ia, alive, 2069 days	1681.4
TCGA-2G-AAH2-01A	20 years, male, white, stage:is, alive, 6060 days	1663.2
TCGA-2G-AAKG-01A	22 years, male, white, stage:i, alive, 6598 days	1650.9
TCGA-XE-AAOF-01A	50 years, male, asian, stage:ia, alive, 1268 days	1641.8
TCGA-2G-AAG0-01A	23 years, male, white, stage:is, alive, 1529 days	1624.2
TCGA-WZ-A8D5-01A	38 years, male, white, alive, 774 days	1620.8
TCGA-XE-AANJ-01A	39 years, male, white, stage:is, alive, 2007 days	1599.3
TCGA-XY-A8S2-01A	67 years, male, white, stage:i, alive, 672 days	1575.6
TCGA-2G-AAGW-01A	38 years, male, white, stage:is, alive, 4899 days	1573.1
TCGA-2G-AAGN-01A	41 years, male, white, stage:iiib, alive, 3656 days	1563.1
TCGA-2G-AAG6-01A	24 years, male, white, stage:is, alive, 2231 days	1538.8
TCGA-2G-AAF8-01A	33 years, male, white, stage:ia, alive, 3911 days	1518.5
TCGA-2G-AAGC-01A	28 years, male, white, stage:is, alive, 2585 days	1501.4
TCGA-2G-AAGA-01A	38 years, male, white, stage:iia, alive, 2439 days	1465.2
TCGA-2G-AAGI-01A	33 years, male, white, stage:is, alive, 3137 days	1452.1
TCGA-2G-AAKM-01A	14 years, male, white, stage:ii, dead, 6972 days	1443.8
TCGA-YU-A94I-01A	66 years, male, stage:ia, alive, 536 days	1434.7
TCGA-2G-AAGO-01A	41 years, male, white, stage:is, alive, 4026 days	1428.9
TCGA-XY-A89B-01A	35 years, male, white, stage:ia, alive, 471 days	1427.5
TCGA-2G-AAGM-01A	51 years, male, white, stage:is, alive, 3891 days	1423.6
TCGA-XE-A8H1-01A	24 years, male, white, stage:is, alive, 209 days	1422.6
TCGA-2G-AAG9-01A	25 years, male, white, stage:iiib, alive, 2234 days	1383.1
TCGA-2G-AAHG-01A	25 years, male, white, stage:i, alive, 1819 days	1378.6
TCGA-2G-AAF6-01A	28 years, male, white, stage:is, alive, 3491 days	1370.6
TCGA-2G-AAFG-01A	30 years, male, white, stage:is, alive, 6183 days	1370.5
TCGA-2G-AAGX-01A	22 years, male, white, stage:ia, alive, 5514 days	1361.9
TCGA-VF-A8AA-01A	51 years, male, white, stage:i, alive, 1146 days	1344.8
TCGA-2G-AAGE-01A	21 years, male, white, stage:is, alive, 2478 days	1301.3
TCGA-2G-AAFJ-01A	23 years, male, asian, alive, 792 days	1287.0
TCGA-2G-AAEW-01A	31 years, male, white, stage:is, dead, 618 days	1270.9
TCGA-2G-AAF4-01A	30 years, male, white, stage:i, alive, 2315 days	1269.8
TCGA-2G-AAKH-01A	19 years, male, white, stage:ii, alive, 6862 days	1268.1
TCGA-XE-AANR-01A	24 years, male, white, stage:i, alive, 14 days	1236.7
TCGA-2G-AAHT-01A	32 years, male, white, stage:is, alive, 542 days	1212.1
TCGA-2G-AAHP-01A	31 years, male, white, stage:is, alive, 5667 days	1203.8
TCGA-WZ-A7V4-01A	28 years, male, white, stage:i, alive, 894 days	1200.8
TCGA-2G-AAGS-01A	39 years, male, white, stage:iiib, alive, 4816 days	1182.2
TCGA-2G-AAFH-01A	38 years, male, white, stage:iib, alive, 1375 days	1175.7
TCGA-2G-AAEX-01A	38 years, male, white, stage:is, alive, 1259 days	1172.2
TCGA-2G-AAF1-01A	28 years, male, asian, stage:is, alive, 1403 days	1157.4
TCGA-2G-AAG7-01A	33 years, male, white, stage:is, alive, 2475 days	1154.9
TCGA-2G-AAFZ-01A	32 years, male, white, stage:iii, alive, 1353 days	1140.1
TCGA-SB-A6J6-01A	22 years, male, white, stage:ia, alive, 413 days	1092.4
TCGA-W4-A7U4-01A	23 years, male, white, alive, 738 days	1064.0
TCGA-4K-AA1G-01A	34 years, male, white, stage:is, alive, 436 days	1057.3
TCGA-YU-A912-01A	34 years, male, black or african american, stage:iiic, alive, 866 days	1046.7
TCGA-2G-AAH0-01A	30 years, male, white, stage:is, alive, 5477 days	1041.0
TCGA-2G-AAG3-01A	53 years, male, white, stage:is, alive, 1593 days	1037.1
TCGA-XE-A9SE-01A	35 years, male, white, stage:ia, alive, 708 days	1031.3
TCGA-XE-A8H5-01A	29 years, male, stage:is, alive, 1217 days	963.4
TCGA-SB-A76C-01A	38 years, male, white, alive, 42 days	962.6
TCGA-WZ-A7V3-01A	20 years, male, white, stage:i, alive, 753 days	959.5
TCGA-YU-A90W-01A	45 years, male, white, stage:ia, alive, 1113 days	955.6
TCGA-SN-A84Y-01A	18 years, male, white, stage:is, alive, 524 days	931.8
TCGA-XY-A9T9-01A	37 years, male, white, stage:is, alive, 281 days	917.3
TCGA-XE-AANV-01A	52 years, male, stage:ib, alive, 1701 days	885.8
TCGA-SN-A6IS-01A	26 years, male, white, stage:is, alive, 496 days	856.6
TCGA-WZ-A7V5-01A	27 years, male, white, stage:i, alive, 1061 days	852.6
TCGA-2G-AAH8-01A	45 years, male, white, stage:iiic, alive, 2248 days	835.2
TCGA-W4-A7U2-01A	26 years, male, white, alive, 1263 days	794.8
TCGA-2G-AAGV-01A	23 years, male, white, alive, 4527 days	792.0
TCGA-S6-A8JY-01A	27 years, male, white, stage:is, alive, 278 days	769.7
TCGA-SO-A8JP-01A	29 years, male, white, stage:i, alive, 540 days	712.3
TCGA-XE-AAOL-01A	38 years, male, black or african american, stage:i, alive, 13 days	711.4
TCGA-2X-A9D6-01A	42 years, male, white, stage:i, alive, 607 days	669.1
TCGA-XE-AAO3-01A	33 years, male, asian, stage:i, alive, 2857 days	668.5
TCGA-2G-AAH3-01A	20 years, male, white, stage:i, alive, 1822 days	597.1
TCGA-S6-A8JW-01A	37 years, male, white, stage:is, alive, 698 days	525.1
TCGA-S6-A8JX-01A	27 years, male, white, stage:ib, alive, 552 days	463.8
TCGA-YU-A90Q-01A	21 years, male, stage:ib, alive, 1964 days	412.3
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TESTIS CANCER - Protein expressionⁱ

Pending cancer tissue analysis