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GABARAPL2
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:306.0 nTPM
HPA:306.0 nTPM
GTEx:398.9 nTPM
FANTOM5:186.9 Scaled Tags Per Million
Pig:371.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 306.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 302.1
1981 Female, age 72, midline 355.9
2048 Male, age 55, midline 322.8
2816 Male, age 47, midline 285.8
2194 Female, age 79, both hemispheres 279.5
2565 Male, age 75, midline 266.7
Cervical spinal cord, dorsal horn
nTPM: 306.0
2173 Female, age 72, unknown 375.4
2296 Male, age 66, both hemispheres 334.6
2069 Male, age 47, both hemispheres 305.5
1877 Male, age 55, unknown 298.8
2297 Male, age 75, both hemispheres 262.9
2721 Male, age 90, both hemispheres 258.6
Cervical spinal cord, ventral horn
nTPM: 296.6
2098 Female, age 72, unknown 353.0
2809 Male, age 90, both hemispheres 301.9
2480 Male, age 75, both hemispheres 297.3
2295 Male, age 66, both hemispheres 293.2
2068 Male, age 55, unknown 280.6
2820 Female, age 79, both hemispheres 253.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 398.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 398.9
Samples: 159

Max nTPM: 710.3
Min nTPM: 244.0
Std nTPM: 79.1
Median nTPM: 388.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 710.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 627.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 609.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 577.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 561.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 559.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 559.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 544.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 538.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 523.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 514.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 509.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 498.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 497.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 494.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 493.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 491.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 491.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 486.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 485.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 485.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 485.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 480.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 477.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 475.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 475.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 474.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 471.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 467.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 467.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 465.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 465.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 464.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 464.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 463.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 462.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 457.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 457.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 457.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 455.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 454.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 451.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 447.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 444.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 440.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 439.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 436.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 435.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 433.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 427.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 427.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 426.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 426.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 423.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 422.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 419.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 419.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 416.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 412.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 411.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 410.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 410.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 409.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 406.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 404.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 403.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 401.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 400.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 397.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 396.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 396.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 395.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 394.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 394.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 393.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 393.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 391.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 389.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 389.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 388.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 387.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 387.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 386.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 385.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 383.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 383.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 381.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 381.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 381.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 380.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 379.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 379.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 379.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 378.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 377.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 377.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 377.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 375.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 374.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 374.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 373.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 372.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 370.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 370.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 370.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 369.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 368.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 367.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 364.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 362.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 361.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 361.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 359.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 358.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 355.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 353.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 353.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 349.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 348.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 344.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 343.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 339.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 337.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 335.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 335.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 334.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 332.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 331.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 330.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 330.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 328.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 327.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 324.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 320.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 318.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 313.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 312.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 309.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 309.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 308.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 304.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 303.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 299.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 298.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 297.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 296.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 295.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 292.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 289.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 285.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 279.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 272.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 269.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 266.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 265.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 262.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 253.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 248.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 244.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 186.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 186.9
FF:10181-103D1 60 years, female 222.9
FF:10159-103A6 76 years, female 150.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 371.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 293.6
Samples: 4

Max nTPM: 317.2
Min nTPM: 273.8
Sample A Female 317.2
Sample B Female 289.0
Sample C Male 294.3
Sample D Male 273.8
Ventral spinal cord
nTPM: 371.3
Samples: 4

Max nTPM: 400.4
Min nTPM: 337.2
Sample A Female 363.5
Sample B Female 384.1
Sample C Male 337.2
Sample D Male 400.4

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