HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.7 nTPM
HPA:41.7 nTPM
GTEx:44.0 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:4.1 nTPM
Mouse:3.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018843Antibody HPA019080Antibody HPA019092
Glial cells LowNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.7
Sample id Sample description nTPM
Hippocampus
nTPM: 41.7
1855 Male, age 76, left hemisphere 44.9
1898 Male, age 80, left hemisphere 41.9
1911 Female, age 85, right hemisphere 41.4
2529 Female, age 94, left hemisphere 41.1
2621 Female, age 67, right hemisphere 40.9
2148 Female, age 91, left hemisphere 40.3
Dentate gyrus
nTPM: 40.3
2010 Male, age 76, both hemispheres 45.2
2530 Female, age 94, left hemisphere 41.0
2528 Male, age 74, both hemispheres 39.7
1927 Female, age 91, both hemispheres 39.1
2246 Female, age 85, both hemispheres 38.6
2531 Female, age 67, both hemispheres 38.1
Entorhinal gyrus
nTPM: 39.9
2117 Female, age 91, right hemisphere 47.7
1787 Male, age 76, left hemisphere 42.0
1938 Female, age 85, left hemisphere 38.0
2764 Male, age 80, right hemisphere 37.8
2686 Male, age 75, right hemisphere 37.6
2613 Female, age 94, left hemisphere 36.4
Hippocampus, CA1
nTPM: 39.5
2045 Male, age 76, both hemispheres 41.8
2082 Female, age 91, right hemisphere 41.4
1873 Female, age 85, both hemispheres 40.1
2527 Male, age 74, both hemispheres 38.4
2749 Male, age 80, left hemisphere 35.7
Hippocampus, CA2
nTPM: 41.3
1940 Female, age 85, left hemisphere 47.3
2113 Female, age 91, right hemisphere 41.5
2437 Female, age 94, left hemisphere 41.2
2249 Male, age 74, both hemispheres 41.1
1963 Male, age 80, left hemisphere 38.7
1892 Male, age 76, both hemispheres 38.0
Hippocampus, CA3
nTPM: 38.2
1867 Male, age 76, both hemispheres 41.3
1891 Female, age 85, both hemispheres 38.8
2436 Male, age 74, both hemispheres 38.2
2861 Female, age 67, both hemispheres 37.9
2620 Female, age 94, left hemisphere 37.4
2137 Male, age 80, left hemisphere 35.7
Parahippocampal cortex
nTPM: 39.1
2018 Male, age 76, both hemispheres 44.1
2250 Female, age 67, right hemisphere 42.3
2693 Female, age 94, both hemispheres 40.2
2245 Female, age 91, both hemispheres 38.7
2622 Female, age 67, right hemisphere 38.7
2692 Male, age 74, both hemispheres 38.5
1990 Female, age 91, right hemisphere 37.7
1850 Male, age 80, both hemispheres 37.3
1933 Female, age 85, both hemispheres 36.8
2532 Female, age 72, left hemisphere 36.5
Perirhinal gyrus
nTPM: 38.1
2521 Female, age 94, right hemisphere 39.5
1847 Female, age 91, left hemisphere 38.7
2848 Male, age 76, right hemisphere 37.5
1794 Male, age 80, right hemisphere 37.3
1841 Female, age 85, right hemisphere 37.3
Subiculum
nTPM: 40.8
2042 Male, age 76, both hemispheres 46.4
2729 Female, age 91, right hemisphere 46.3
1901 Male, age 80, both hemispheres 39.5
2619 Male, age 74, both hemispheres 39.2
1977 Female, age 85, both hemispheres 36.8
2438 Female, age 94, left hemisphere 36.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 195.8
Min nTPM: 12.5
Std nTPM: 23.8
Median nTPM: 39.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 195.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 130.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 119.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 105.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 104.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 101.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 100.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 98.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 94.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 93.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 84.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10169-103B7 60 years, female 11.5
FF:10153-102I9 76 years, female 7.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 4.0
Sample C Male 3.3
Sample D Male 4.6
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.6
Sample A Female 4.4
Sample B Female 3.6
Sample C Male 3.9
Sample D Male 4.5
Subiculum
nTPM: 3.9
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.5
Sample A Female 2.5
Sample B Female 4.4
Sample C Male 4.2
Sample D Male 4.3
Ventral hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.6
Sample A Female 3.9
Sample B Female 4.8
Sample C Male 4.1
Sample D Male 3.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.3
Sample A Male 3.0
Sample B Male 2.3
Sample C Female 3.2
Sample D Female 2.5
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.5
Sample A Male 3.7
Sample B Male 2.5
Sample C Female 3.1
Sample D Female 4.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
67978490 Antisense, RP_040923_01_C06, Mouse strain C57BL/6J (56 days, male) 0.0

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