COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:91.5 nTPM
HPA:69.8 nTPM
GTEx:91.5 nTPM
FANTOM5:100.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 69.8
overview
Male, age 54 		Colon sample 67
nTPM: 64.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 65
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 88.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 75.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 90.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 67.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 67.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 69.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 56.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 78.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 57.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 62.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 66.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 91.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 81.5
Samples: 373

Max nTPM: 231.9
Min nTPM: 48.1
Std nTPM: 18.7
Median nTPM: 79.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 231.9
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 169.9
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 159.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 158.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 131.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 128.9
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 128.8
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 127.0
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 120.1
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 118.1
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 117.0
Show allShow less
Colon - Transverse
Average nTPM: 91.5
Samples: 406

Max nTPM: 209.9
Min nTPM: 48.3
Std nTPM: 24.7
Median nTPM: 86.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 209.9
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 178.2
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 175.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 174.2
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 167.4
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 165.1
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 163.4
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 159.7
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 159.3
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 158.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 157.4
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 100.2
FF:10014-101C5 62,83,84 years, mixed 100.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.