HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:447.8 nTPM
HPA:447.8 nTPM
GTEx:403.2 nTPM
FANTOM5:1277.0 Scaled Tags Per Million
Pig:556.4 nTPM
Mouse:695.6 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002913
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 447.8
Sample id Sample description nTPM
Hippocampus
nTPM: 442.6
1898 Male, age 80, left hemisphere 478.7
1911 Female, age 85, right hemisphere 461.2
1855 Male, age 76, left hemisphere 454.8
2529 Female, age 94, left hemisphere 451.1
2148 Female, age 91, left hemisphere 414.9
2621 Female, age 67, right hemisphere 394.7
Dentate gyrus
nTPM: 421.3
2010 Male, age 76, both hemispheres 485.5
2528 Male, age 74, both hemispheres 485.1
2530 Female, age 94, left hemisphere 420.2
2246 Female, age 85, both hemispheres 408.3
1927 Female, age 91, both hemispheres 384.6
2531 Female, age 67, both hemispheres 344.2
Entorhinal gyrus
nTPM: 372.7
2117 Female, age 91, right hemisphere 502.5
1938 Female, age 85, left hemisphere 409.1
2764 Male, age 80, right hemisphere 372.5
1787 Male, age 76, left hemisphere 351.0
2686 Male, age 75, right hemisphere 308.0
2613 Female, age 94, left hemisphere 293.4
Hippocampus, CA1
nTPM: 447.8
2749 Male, age 80, left hemisphere 495.9
1873 Female, age 85, both hemispheres 484.6
2527 Male, age 74, both hemispheres 446.8
2045 Male, age 76, both hemispheres 433.0
2082 Female, age 91, right hemisphere 378.5
Hippocampus, CA2
nTPM: 424.0
1963 Male, age 80, left hemisphere 495.5
2249 Male, age 74, both hemispheres 489.9
1892 Male, age 76, both hemispheres 418.5
2113 Female, age 91, right hemisphere 411.8
1940 Female, age 85, left hemisphere 379.1
2437 Female, age 94, left hemisphere 349.4
Hippocampus, CA3
nTPM: 403.5
1891 Female, age 85, both hemispheres 474.4
2137 Male, age 80, left hemisphere 431.6
1867 Male, age 76, both hemispheres 419.2
2436 Male, age 74, both hemispheres 380.4
2620 Female, age 94, left hemisphere 376.0
2861 Female, age 67, both hemispheres 339.2
Parahippocampal cortex
nTPM: 373.6
1933 Female, age 85, both hemispheres 428.2
2250 Female, age 67, right hemisphere 412.3
2018 Male, age 76, both hemispheres 405.2
2692 Male, age 74, both hemispheres 379.1
1990 Female, age 91, right hemisphere 368.3
1850 Male, age 80, both hemispheres 364.1
2532 Female, age 72, left hemisphere 357.5
2245 Female, age 91, both hemispheres 357.4
2693 Female, age 94, both hemispheres 339.0
2622 Female, age 67, right hemisphere 325.1
Perirhinal gyrus
nTPM: 353.9
1841 Female, age 85, right hemisphere 364.2
1794 Male, age 80, right hemisphere 360.1
1847 Female, age 91, left hemisphere 355.8
2521 Female, age 94, right hemisphere 352.0
2848 Male, age 76, right hemisphere 337.5
Subiculum
nTPM: 427.3
2042 Male, age 76, both hemispheres 488.1
2729 Female, age 91, right hemisphere 469.9
1901 Male, age 80, both hemispheres 449.0
1977 Female, age 85, both hemispheres 422.7
2619 Male, age 74, both hemispheres 393.1
2438 Female, age 94, left hemisphere 340.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 403.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 403.2
Samples: 197

Max nTPM: 848.6
Min nTPM: 53.7
Std nTPM: 108.7
Median nTPM: 388.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 848.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 671.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 655.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 642.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 634.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 627.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 623.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 615.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 614.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 599.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 599.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1277.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1277.0
FF:10153-102I9 76 years, female 1301.6
FF:10169-103B7 60 years, female 1252.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 556.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 556.4
Samples: 4

Max nTPM: 686.0
Min nTPM: 415.9
Sample A Female 686.0
Sample B Female 501.6
Sample C Male 622.1
Sample D Male 415.9
Entorhinal cortex
nTPM: 483.5
Samples: 4

Max nTPM: 569.0
Min nTPM: 401.3
Sample A Female 467.6
Sample B Female 495.9
Sample C Male 569.0
Sample D Male 401.3
Subiculum
nTPM: 526.1
Samples: 4

Max nTPM: 608.5
Min nTPM: 478.3
Sample A Female 608.5
Sample B Female 532.2
Sample C Male 485.4
Sample D Male 478.3
Ventral hippocampus
nTPM: 495.5
Samples: 4

Max nTPM: 537.2
Min nTPM: 429.4
Sample A Female 485.5
Sample B Female 429.4
Sample C Male 530.0
Sample D Male 537.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 695.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 634.8
Samples: 4

Max nTPM: 652.7
Min nTPM: 601.7
Sample A Male 649.5
Sample B Male 635.1
Sample C Female 652.7
Sample D Female 601.7
Hippocampal formation
nTPM: 695.6
Samples: 4

Max nTPM: 746.2
Min nTPM: 631.8
Sample A Male 746.2
Sample B Male 697.0
Sample C Female 707.5
Sample D Female 631.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
544520 Antisense, RP_040324_01_G06, Mouse strain C57BL/6J (56 days, male) 22.5
74357593 Antisense, RP_060117_01_A08, Mouse strain C57BL/6J (56 days, male) 16.4

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The Human Protein Atlas

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