HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.2 nTPM
HPA:15.2 nTPM
GTEx:30.4 nTPM
FANTOM5:9.6 Scaled Tags Per Million
Pig:10.3 nTPM
Mouse:14.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000918
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
1898 Male, age 80, left hemisphere 17.4
1911 Female, age 85, right hemisphere 14.7
2529 Female, age 94, left hemisphere 14.3
2621 Female, age 67, right hemisphere 13.7
2148 Female, age 91, left hemisphere 13.6
1855 Male, age 76, left hemisphere 13.3
Dentate gyrus
nTPM: 14.3
1927 Female, age 91, both hemispheres 16.6
2530 Female, age 94, left hemisphere 15.9
2531 Female, age 67, both hemispheres 13.7
2010 Male, age 76, both hemispheres 13.6
2528 Male, age 74, both hemispheres 13.4
2246 Female, age 85, both hemispheres 12.7
Entorhinal gyrus
nTPM: 15.2
2613 Female, age 94, left hemisphere 17.1
2686 Male, age 75, right hemisphere 16.2
1938 Female, age 85, left hemisphere 15.0
2764 Male, age 80, right hemisphere 15.0
2117 Female, age 91, right hemisphere 14.2
1787 Male, age 76, left hemisphere 13.7
Hippocampus, CA1
nTPM: 13.8
2749 Male, age 80, left hemisphere 16.0
1873 Female, age 85, both hemispheres 14.1
2527 Male, age 74, both hemispheres 14.1
2082 Female, age 91, right hemisphere 13.0
2045 Male, age 76, both hemispheres 12.1
Hippocampus, CA2
nTPM: 14.6
1963 Male, age 80, left hemisphere 19.1
1892 Male, age 76, both hemispheres 15.3
1940 Female, age 85, left hemisphere 13.6
2113 Female, age 91, right hemisphere 13.4
2437 Female, age 94, left hemisphere 13.3
2249 Male, age 74, both hemispheres 12.7
Hippocampus, CA3
nTPM: 13.9
2861 Female, age 67, both hemispheres 15.9
2620 Female, age 94, left hemisphere 15.8
2137 Male, age 80, left hemisphere 15.0
1891 Female, age 85, both hemispheres 13.6
1867 Male, age 76, both hemispheres 13.2
2436 Male, age 74, both hemispheres 9.7
Parahippocampal cortex
nTPM: 13.5
1933 Female, age 85, both hemispheres 15.5
1990 Female, age 91, right hemisphere 14.5
1850 Male, age 80, both hemispheres 14.0
2532 Female, age 72, left hemisphere 13.7
2692 Male, age 74, both hemispheres 13.6
2245 Female, age 91, both hemispheres 13.3
2693 Female, age 94, both hemispheres 13.3
2622 Female, age 67, right hemisphere 13.2
2250 Female, age 67, right hemisphere 11.8
2018 Male, age 76, both hemispheres 11.5
Perirhinal gyrus
nTPM: 14.4
1794 Male, age 80, right hemisphere 15.7
1841 Female, age 85, right hemisphere 14.6
1847 Female, age 91, left hemisphere 14.1
2848 Male, age 76, right hemisphere 13.9
2521 Female, age 94, right hemisphere 13.8
Subiculum
nTPM: 13.3
1901 Male, age 80, both hemispheres 15.5
1977 Female, age 85, both hemispheres 15.0
2729 Female, age 91, right hemisphere 13.8
2042 Male, age 76, both hemispheres 12.4
2619 Male, age 74, both hemispheres 12.4
2438 Female, age 94, left hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.4
Samples: 197

Max nTPM: 66.0
Min nTPM: 8.9
Std nTPM: 11.6
Median nTPM: 29.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 66.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 59.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 57.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 55.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 55.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 54.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.6
FF:10153-102I9 76 years, female 14.0
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.3
Sample A Female 10.3
Sample B Female 9.6
Sample C Male 9.0
Sample D Male 7.3
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.0
Min nTPM: 9.4
Sample A Female 10.1
Sample B Female 10.7
Sample C Male 11.0
Sample D Male 9.4
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.0
Sample A Female 10.5
Sample B Female 8.5
Sample C Male 9.4
Sample D Male 7.0
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 6.9
Sample A Female 9.4
Sample B Female 6.9
Sample C Male 12.8
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 10.6
Sample A Male 14.3
Sample B Male 15.7
Sample C Female 10.6
Sample D Female 15.8
Hippocampal formation
nTPM: 11.9
Samples: 4

Max nTPM: 14.6
Min nTPM: 9.9
Sample A Male 10.5
Sample B Male 9.9
Sample C Female 12.4
Sample D Female 14.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69817229 Antisense, RP_050510_02_H08, Mouse strain C57BL/6J (56 days, male) 0.3

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