HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.4 nTPM
HPA:48.4 nTPM
GTEx:53.1 nTPM
FANTOM5:28.9 Scaled Tags Per Million
Pig:15.4 nTPM
Mouse:85.4 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026851Antibody HPA047562
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.4
Sample id Sample description nTPM
Hippocampus
nTPM: 48.4
2529 Female, age 94, left hemisphere 49.8
2621 Female, age 67, right hemisphere 49.6
1898 Male, age 80, left hemisphere 48.7
2148 Female, age 91, left hemisphere 48.1
1855 Male, age 76, left hemisphere 47.3
1911 Female, age 85, right hemisphere 47.2
Dentate gyrus
nTPM: 48.0
2530 Female, age 94, left hemisphere 50.0
2010 Male, age 76, both hemispheres 48.7
1927 Female, age 91, both hemispheres 48.4
2528 Male, age 74, both hemispheres 47.7
2531 Female, age 67, both hemispheres 47.0
2246 Female, age 85, both hemispheres 46.3
Entorhinal gyrus
nTPM: 47.6
2764 Male, age 80, right hemisphere 48.9
1787 Male, age 76, left hemisphere 48.4
1938 Female, age 85, left hemisphere 48.1
2686 Male, age 75, right hemisphere 47.3
2117 Female, age 91, right hemisphere 46.7
2613 Female, age 94, left hemisphere 46.0
Hippocampus, CA1
nTPM: 47.7
2749 Male, age 80, left hemisphere 51.3
2527 Male, age 74, both hemispheres 47.9
2082 Female, age 91, right hemisphere 47.6
2045 Male, age 76, both hemispheres 46.2
1873 Female, age 85, both hemispheres 45.6
Hippocampus, CA2
nTPM: 48.3
1892 Male, age 76, both hemispheres 50.2
1963 Male, age 80, left hemisphere 49.8
1940 Female, age 85, left hemisphere 48.2
2249 Male, age 74, both hemispheres 47.8
2437 Female, age 94, left hemisphere 47.8
2113 Female, age 91, right hemisphere 46.1
Hippocampus, CA3
nTPM: 47.2
2137 Male, age 80, left hemisphere 49.4
1867 Male, age 76, both hemispheres 48.3
1891 Female, age 85, both hemispheres 47.3
2620 Female, age 94, left hemisphere 47.0
2436 Male, age 74, both hemispheres 46.0
2861 Female, age 67, both hemispheres 45.1
Parahippocampal cortex
nTPM: 47.3
2245 Female, age 91, both hemispheres 49.0
1990 Female, age 91, right hemisphere 48.2
2018 Male, age 76, both hemispheres 48.1
1933 Female, age 85, both hemispheres 47.9
1850 Male, age 80, both hemispheres 47.7
2532 Female, age 72, left hemisphere 47.2
2692 Male, age 74, both hemispheres 46.9
2622 Female, age 67, right hemisphere 46.7
2250 Female, age 67, right hemisphere 46.0
2693 Female, age 94, both hemispheres 45.3
Perirhinal gyrus
nTPM: 47.1
1847 Female, age 91, left hemisphere 47.9
2521 Female, age 94, right hemisphere 47.7
1794 Male, age 80, right hemisphere 46.9
2848 Male, age 76, right hemisphere 46.9
1841 Female, age 85, right hemisphere 46.2
Subiculum
nTPM: 48.1
2438 Female, age 94, left hemisphere 49.8
2042 Male, age 76, both hemispheres 49.7
1901 Male, age 80, both hemispheres 49.2
1977 Female, age 85, both hemispheres 47.5
2619 Male, age 74, both hemispheres 47.4
2729 Female, age 91, right hemisphere 45.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.1
Samples: 197

Max nTPM: 127.6
Min nTPM: 21.5
Std nTPM: 14.7
Median nTPM: 50.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 111.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 97.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 95.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 92.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 87.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 82.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 82.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 80.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.9
FF:10153-102I9 76 years, female 30.6
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 19.9
Min nTPM: 10.8
Sample A Female 19.9
Sample B Female 14.8
Sample C Male 16.0
Sample D Male 10.8
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 11.1
Sample A Female 12.2
Sample B Female 13.1
Sample C Male 12.8
Sample D Male 11.1
Subiculum
nTPM: 13.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.2
Sample A Female 16.6
Sample B Female 13.4
Sample C Male 12.1
Sample D Male 10.2
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.4
Sample A Female 16.2
Sample B Female 12.5
Sample C Male 15.9
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.4
Samples: 4

Max nTPM: 88.6
Min nTPM: 78.3
Sample A Male 86.8
Sample B Male 87.9
Sample C Female 88.6
Sample D Female 78.3
Hippocampal formation
nTPM: 79.8
Samples: 4

Max nTPM: 89.0
Min nTPM: 70.8
Sample A Male 83.1
Sample B Male 76.2
Sample C Female 70.8
Sample D Female 89.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68546242 Antisense, RP_050120_02_C02, Mouse strain C57BL/6J (56 days, male) 1.6

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