HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.3 nTPM
HPA:59.3 nTPM
GTEx:52.5 nTPM
FANTOM5:160.8 Scaled Tags Per Million
Pig:117.9 nTPM
Mouse:246.1 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049290Antibody HPA057668
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 55.7
1898 Male, age 80, left hemisphere 62.3
2529 Female, age 94, left hemisphere 57.8
2621 Female, age 67, right hemisphere 55.8
1855 Male, age 76, left hemisphere 55.2
1911 Female, age 85, right hemisphere 53.8
2148 Female, age 91, left hemisphere 49.2
Dentate gyrus
nTPM: 54.3
2528 Male, age 74, both hemispheres 57.9
2010 Male, age 76, both hemispheres 57.6
2246 Female, age 85, both hemispheres 55.0
2530 Female, age 94, left hemisphere 54.0
1927 Female, age 91, both hemispheres 53.6
2531 Female, age 67, both hemispheres 47.6
Entorhinal gyrus
nTPM: 55.6
1938 Female, age 85, left hemisphere 61.5
2117 Female, age 91, right hemisphere 60.5
2764 Male, age 80, right hemisphere 56.3
1787 Male, age 76, left hemisphere 55.4
2686 Male, age 75, right hemisphere 51.6
2613 Female, age 94, left hemisphere 48.1
Hippocampus, CA1
nTPM: 55.4
2527 Male, age 74, both hemispheres 59.8
1873 Female, age 85, both hemispheres 57.6
2749 Male, age 80, left hemisphere 57.2
2082 Female, age 91, right hemisphere 51.3
2045 Male, age 76, both hemispheres 51.2
Hippocampus, CA2
nTPM: 57.7
1892 Male, age 76, both hemispheres 64.0
2249 Male, age 74, both hemispheres 61.5
1940 Female, age 85, left hemisphere 56.6
1963 Male, age 80, left hemisphere 56.6
2437 Female, age 94, left hemisphere 54.0
2113 Female, age 91, right hemisphere 53.7
Hippocampus, CA3
nTPM: 51.9
1867 Male, age 76, both hemispheres 59.5
1891 Female, age 85, both hemispheres 58.3
2436 Male, age 74, both hemispheres 57.6
2137 Male, age 80, left hemisphere 50.2
2861 Female, age 67, both hemispheres 43.3
2620 Female, age 94, left hemisphere 42.1
Parahippocampal cortex
nTPM: 56.0
1850 Male, age 80, both hemispheres 62.8
1990 Female, age 91, right hemisphere 59.0
2250 Female, age 67, right hemisphere 58.7
2532 Female, age 72, left hemisphere 57.8
1933 Female, age 85, both hemispheres 57.3
2018 Male, age 76, both hemispheres 55.8
2693 Female, age 94, both hemispheres 55.2
2692 Male, age 74, both hemispheres 53.3
2245 Female, age 91, both hemispheres 52.4
2622 Female, age 67, right hemisphere 47.3
Perirhinal gyrus
nTPM: 59.3
1841 Female, age 85, right hemisphere 62.4
1847 Female, age 91, left hemisphere 60.0
1794 Male, age 80, right hemisphere 59.3
2848 Male, age 76, right hemisphere 57.7
2521 Female, age 94, right hemisphere 57.3
Subiculum
nTPM: 57.7
2438 Female, age 94, left hemisphere 60.7
2042 Male, age 76, both hemispheres 58.8
1977 Female, age 85, both hemispheres 58.4
2619 Male, age 74, both hemispheres 57.5
1901 Male, age 80, both hemispheres 57.4
2729 Female, age 91, right hemisphere 53.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.5
Samples: 197

Max nTPM: 90.0
Min nTPM: 29.3
Std nTPM: 9.7
Median nTPM: 51.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 90.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 74.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 72.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 70.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 70.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 70.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 70.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 70.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 69.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.8
FF:10169-103B7 60 years, female 176.8
FF:10153-102I9 76 years, female 144.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 117.9
Samples: 4

Max nTPM: 153.2
Min nTPM: 88.7
Sample A Female 153.2
Sample B Female 119.5
Sample C Male 110.2
Sample D Male 88.7
Entorhinal cortex
nTPM: 100.6
Samples: 4

Max nTPM: 115.6
Min nTPM: 84.1
Sample A Female 115.6
Sample B Female 104.9
Sample C Male 97.7
Sample D Male 84.1
Subiculum
nTPM: 102.5
Samples: 4

Max nTPM: 132.0
Min nTPM: 91.1
Sample A Female 132.0
Sample B Female 95.3
Sample C Male 91.1
Sample D Male 91.7
Ventral hippocampus
nTPM: 110.2
Samples: 4

Max nTPM: 130.2
Min nTPM: 74.9
Sample A Female 117.5
Sample B Female 74.9
Sample C Male 130.2
Sample D Male 118.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 246.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 246.1
Samples: 4

Max nTPM: 264.5
Min nTPM: 236.9
Sample A Male 237.4
Sample B Male 236.9
Sample C Female 245.4
Sample D Female 264.5
Hippocampal formation
nTPM: 242.2
Samples: 4

Max nTPM: 257.3
Min nTPM: 230.1
Sample A Male 257.3
Sample B Male 232.8
Sample C Female 248.7
Sample D Female 230.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
491 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 5.7
492 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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