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RPL18
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  • RPL18
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:622.0 nTPM
FANTOM5:168.8 Scaled Tags Per Million
Pig:253.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA046572
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 622.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 622.0
Samples: 246

Max nTPM: 2320.6
Min nTPM: 211.1
Std nTPM: 220.4
Median nTPM: 592.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2320.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1495.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1343.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1230.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1093.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1091.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1079.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1061.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1058.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1046.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1025.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1006.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 962.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 961.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 956.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 955.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 921.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 916.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 895.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 892.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 892.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 876.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 872.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 866.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 866.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 865.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 865.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 853.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 829.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 828.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 826.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 825.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 822.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 816.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 812.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 811.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 810.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 803.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 802.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 800.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 794.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 792.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 790.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 789.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 782.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 781.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 779.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 778.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 765.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 765.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 762.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 762.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 758.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 756.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 749.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 747.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 738.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 736.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 732.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 729.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 727.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 723.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 723.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 723.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 714.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 712.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 702.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 694.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 692.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 692.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 690.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 689.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 687.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 684.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 678.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 669.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 668.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 665.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 665.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 664.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 661.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 652.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 651.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 648.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 645.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 644.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 644.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 643.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 640.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 639.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 638.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 638.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 638.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 636.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 633.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 632.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 631.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 631.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 631.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 631.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 627.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 625.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 623.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 621.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 613.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 612.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 611.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 611.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 610.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 609.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 608.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 608.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 608.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 600.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 599.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 599.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 599.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 598.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 598.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 596.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 595.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 594.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 593.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 592.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 591.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 589.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 584.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 583.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 582.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 582.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 582.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 581.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 580.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 578.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 577.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 572.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 567.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 566.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 565.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 564.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 562.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 561.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 561.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 560.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 560.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 559.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 558.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 557.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 557.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 553.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 553.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 553.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 551.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 542.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 542.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 537.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 535.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 533.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 531.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 530.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 528.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 526.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 524.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 524.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 522.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 521.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 520.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 515.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 515.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 514.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 513.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 511.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 506.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 505.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 492.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 490.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 487.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 486.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 484.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 481.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 475.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 475.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 474.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 473.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 472.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 470.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 470.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 470.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 469.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 462.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 462.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 461.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 458.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 457.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 456.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 454.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 453.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 452.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 451.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 451.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 450.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 443.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 442.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 442.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 439.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 439.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 436.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 436.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 435.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 435.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 427.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 427.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 426.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 425.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 424.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 423.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 418.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 418.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 417.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 409.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 408.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 402.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 397.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 394.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 391.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 388.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 387.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 383.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 383.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 370.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 369.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 362.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 358.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 357.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 350.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 349.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 347.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 347.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 345.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 342.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 326.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 309.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 302.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 260.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 239.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 211.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 168.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 168.8
FF:10164-103B2 76 years, female 168.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 253.4
Pig sample Sample description nTPM
Caudate
nTPM: 253.4
Samples: 4

Max nTPM: 291.8
Min nTPM: 202.1
Sample A Female 254.0
Sample B Female 265.7
Sample C Male 291.8
Sample D Male 202.1

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