HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Mouse brain, Intensity
Hippocampal formationi 		55.713
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.3 nTPM
HPA:70.3 nTPM
GTEx:54.8 nTPM
FANTOM5:106.5 Scaled Tags Per Million
Pig:58.8 nTPM
Mouse:105.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043562Antibody CAB010910
Glial cells Not detectedHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA043562
Hippocampal formation mean intensity 55.713
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 10.910
Molecular layer of the dentate gyrus 3.606
Granular dentate gyrus 55.009
CA1 - oriens layer 2.937
CA1 - pyramidal layer 55.713
CA1 - radiatum layer 4.302
CA2 - oriens layer 1.351
CA2 - pyramidal layer 23.832
CA2 - radiatum layer 2.893
CA3 - oriens layer 0.881
CA3 - pyramidal layer 23.232
CA3 - radiatum layer 2.092
Stratum lucidum 9.310
Lacunosum moleculare 7.193
Subiculum 35.908

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.3
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
2148 Female, age 91, left hemisphere 69.8
2621 Female, age 67, right hemisphere 69.7
2529 Female, age 94, left hemisphere 69.5
1898 Male, age 80, left hemisphere 69.4
1911 Female, age 85, right hemisphere 68.3
1855 Male, age 76, left hemisphere 66.0
Dentate gyrus
nTPM: 69.0
2530 Female, age 94, left hemisphere 71.1
1927 Female, age 91, both hemispheres 69.6
2528 Male, age 74, both hemispheres 69.5
2010 Male, age 76, both hemispheres 69.4
2246 Female, age 85, both hemispheres 68.3
2531 Female, age 67, both hemispheres 65.9
Entorhinal gyrus
nTPM: 70.3
2764 Male, age 80, right hemisphere 72.0
2117 Female, age 91, right hemisphere 71.2
1787 Male, age 76, left hemisphere 70.7
1938 Female, age 85, left hemisphere 69.7
2613 Female, age 94, left hemisphere 69.5
2686 Male, age 75, right hemisphere 68.5
Hippocampus, CA1
nTPM: 68.8
2082 Female, age 91, right hemisphere 70.8
2749 Male, age 80, left hemisphere 69.9
2527 Male, age 74, both hemispheres 68.7
1873 Female, age 85, both hemispheres 68.2
2045 Male, age 76, both hemispheres 66.3
Hippocampus, CA2
nTPM: 69.8
1940 Female, age 85, left hemisphere 71.2
2249 Male, age 74, both hemispheres 70.4
1963 Male, age 80, left hemisphere 70.0
2113 Female, age 91, right hemisphere 70.0
1892 Male, age 76, both hemispheres 69.3
2437 Female, age 94, left hemisphere 67.6
Hippocampus, CA3
nTPM: 69.9
2620 Female, age 94, left hemisphere 74.2
1891 Female, age 85, both hemispheres 71.5
2436 Male, age 74, both hemispheres 71.1
1867 Male, age 76, both hemispheres 69.0
2137 Male, age 80, left hemisphere 67.3
2861 Female, age 67, both hemispheres 66.0
Parahippocampal cortex
nTPM: 67.3
2250 Female, age 67, right hemisphere 69.2
1990 Female, age 91, right hemisphere 68.9
1850 Male, age 80, both hemispheres 68.7
1933 Female, age 85, both hemispheres 68.3
2532 Female, age 72, left hemisphere 67.4
2692 Male, age 74, both hemispheres 67.3
2693 Female, age 94, both hemispheres 67.3
2245 Female, age 91, both hemispheres 66.0
2018 Male, age 76, both hemispheres 65.1
2622 Female, age 67, right hemisphere 65.1
Perirhinal gyrus
nTPM: 69.0
1794 Male, age 80, right hemisphere 72.5
1847 Female, age 91, left hemisphere 70.1
1841 Female, age 85, right hemisphere 68.4
2521 Female, age 94, right hemisphere 67.8
2848 Male, age 76, right hemisphere 66.4
Subiculum
nTPM: 69.5
1901 Male, age 80, both hemispheres 71.5
2042 Male, age 76, both hemispheres 71.5
2619 Male, age 74, both hemispheres 70.8
1977 Female, age 85, both hemispheres 69.9
2729 Female, age 91, right hemisphere 68.2
2438 Female, age 94, left hemisphere 65.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.8
Samples: 197

Max nTPM: 88.9
Min nTPM: 31.0
Std nTPM: 8.5
Median nTPM: 54.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 88.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 83.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 82.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 82.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 75.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 74.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 72.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 71.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 70.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 70.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 69.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.5
FF:10153-102I9 76 years, female 130.4
FF:10169-103B7 60 years, female 82.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 73.6
Min nTPM: 47.6
Sample A Female 73.6
Sample B Female 56.1
Sample C Male 57.8
Sample D Male 47.6
Entorhinal cortex
nTPM: 49.8
Samples: 4

Max nTPM: 55.2
Min nTPM: 44.6
Sample A Female 55.2
Sample B Female 44.6
Sample C Male 51.6
Sample D Male 47.8
Subiculum
nTPM: 53.1
Samples: 4

Max nTPM: 64.6
Min nTPM: 47.9
Sample A Female 64.6
Sample B Female 47.9
Sample C Male 51.7
Sample D Male 48.1
Ventral hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 73.1
Min nTPM: 44.3
Sample A Female 58.4
Sample B Female 44.3
Sample C Male 73.1
Sample D Male 59.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.5
Samples: 4

Max nTPM: 104.8
Min nTPM: 93.1
Sample A Male 93.1
Sample B Male 95.4
Sample C Female 104.8
Sample D Female 104.8
Hippocampal formation
nTPM: 105.3
Samples: 4

Max nTPM: 109.0
Min nTPM: 101.0
Sample A Male 103.8
Sample B Male 101.0
Sample C Female 109.0
Sample D Female 107.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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