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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:84.4 nTPM
FANTOM5:64.2 Scaled Tags Per Million
Pig:32.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043041Antibody HPA061143
Glial cells MediumMedium
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 84.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.4
Samples: 246

Max nTPM: 157.7
Min nTPM: 39.1
Std nTPM: 21.0
Median nTPM: 81.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 157.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 148.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 144.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 144.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 133.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 131.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 130.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 129.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 127.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 124.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 124.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 124.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 121.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 121.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 121.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 119.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 117.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 115.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 114.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 111.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 111.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 110.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 110.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 110.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 109.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 108.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 107.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 107.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 107.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 107.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 106.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 106.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 106.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 106.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 106.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 105.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 105.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 103.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 103.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 102.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 102.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 101.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 101.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 100.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 100.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 99.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 99.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 99.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 98.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 98.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 97.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 96.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 96.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 96.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 95.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 94.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 94.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 94.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 94.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 93.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 93.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 93.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 92.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 92.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 92.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 92.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 92.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 92.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 92.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 92.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 91.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 90.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 90.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 90.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 90.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 90.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 88.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 88.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 88.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 87.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 87.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 87.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 87.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 87.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 87.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 86.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 86.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 86.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 85.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 85.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 84.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 84.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 84.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 84.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 83.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 83.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 82.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 82.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 82.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 81.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 81.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 81.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 81.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 81.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 81.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 81.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 81.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 80.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 80.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 80.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 80.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 80.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 80.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 80.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 79.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 79.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 79.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 79.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 79.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 78.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 78.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 77.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 77.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 76.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 76.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 76.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 75.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 74.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 74.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 74.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 74.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 73.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 73.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 73.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 73.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 73.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 72.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 72.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 72.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 71.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 71.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 71.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 71.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 70.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 70.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 69.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 69.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 68.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 68.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 68.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 67.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 65.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 65.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 65.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 65.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 64.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 60.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 59.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 57.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 56.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 56.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 55.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 52.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 51.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 46.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 45.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 64.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 64.2
FF:10164-103B2 76 years, female 64.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 32.2
Pig sample Sample description nTPM
Caudate
nTPM: 32.3
Samples: 4

Max nTPM: 36.8
Min nTPM: 28.1
Sample A Female 28.1
Sample B Female 35.5
Sample C Male 36.8
Sample D Male 28.6

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