HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.7 nTPM
HPA:59.7 nTPM
GTEx:33.6 nTPM
FANTOM5:58.3 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:88.5 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031068Antibody HPA072487Antibody CAB024930
Glial cells LowNot detectedLow
Neuronal cells MediumMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.7
Sample id Sample description nTPM
Hippocampus
nTPM: 55.4
2621 Female, age 67, right hemisphere 58.2
1898 Male, age 80, left hemisphere 58.1
1855 Male, age 76, left hemisphere 57.4
2148 Female, age 91, left hemisphere 54.6
2529 Female, age 94, left hemisphere 53.4
1911 Female, age 85, right hemisphere 50.9
Dentate gyrus
nTPM: 54.8
1927 Female, age 91, both hemispheres 57.3
2530 Female, age 94, left hemisphere 56.5
2010 Male, age 76, both hemispheres 55.6
2528 Male, age 74, both hemispheres 55.2
2531 Female, age 67, both hemispheres 52.1
2246 Female, age 85, both hemispheres 52.0
Entorhinal gyrus
nTPM: 57.5
2764 Male, age 80, right hemisphere 60.0
2613 Female, age 94, left hemisphere 58.7
2117 Female, age 91, right hemisphere 58.5
1787 Male, age 76, left hemisphere 57.6
1938 Female, age 85, left hemisphere 56.7
2686 Male, age 75, right hemisphere 53.3
Hippocampus, CA1
nTPM: 55.4
2749 Male, age 80, left hemisphere 58.2
1873 Female, age 85, both hemispheres 55.2
2082 Female, age 91, right hemisphere 54.8
2045 Male, age 76, both hemispheres 54.5
2527 Male, age 74, both hemispheres 54.5
Hippocampus, CA2
nTPM: 57.8
2249 Male, age 74, both hemispheres 62.1
1892 Male, age 76, both hemispheres 61.3
2437 Female, age 94, left hemisphere 58.7
1963 Male, age 80, left hemisphere 56.8
2113 Female, age 91, right hemisphere 55.0
1940 Female, age 85, left hemisphere 52.7
Hippocampus, CA3
nTPM: 56.3
2436 Male, age 74, both hemispheres 69.1
1867 Male, age 76, both hemispheres 55.7
2620 Female, age 94, left hemisphere 55.2
2861 Female, age 67, both hemispheres 53.8
1891 Female, age 85, both hemispheres 52.7
2137 Male, age 80, left hemisphere 51.0
Parahippocampal cortex
nTPM: 55.8
1850 Male, age 80, both hemispheres 59.1
2250 Female, age 67, right hemisphere 59.1
2532 Female, age 72, left hemisphere 58.0
1990 Female, age 91, right hemisphere 57.9
2693 Female, age 94, both hemispheres 57.1
1933 Female, age 85, both hemispheres 56.3
2622 Female, age 67, right hemisphere 53.3
2245 Female, age 91, both hemispheres 52.7
2018 Male, age 76, both hemispheres 52.5
2692 Male, age 74, both hemispheres 52.0
Perirhinal gyrus
nTPM: 59.7
1847 Female, age 91, left hemisphere 63.1
1794 Male, age 80, right hemisphere 62.1
2521 Female, age 94, right hemisphere 58.0
1841 Female, age 85, right hemisphere 57.9
2848 Male, age 76, right hemisphere 57.7
Subiculum
nTPM: 55.0
2438 Female, age 94, left hemisphere 57.5
2619 Male, age 74, both hemispheres 55.6
1977 Female, age 85, both hemispheres 55.4
2729 Female, age 91, right hemisphere 55.1
1901 Male, age 80, both hemispheres 53.7
2042 Male, age 76, both hemispheres 52.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 56.5
Min nTPM: 18.9
Std nTPM: 6.0
Median nTPM: 33.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 56.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 54.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 48.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 47.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 47.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 45.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 44.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 44.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.3
FF:10153-102I9 76 years, female 59.1
FF:10169-103B7 60 years, female 57.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 52.3
Min nTPM: 33.9
Sample A Female 52.3
Sample B Female 40.7
Sample C Male 47.6
Sample D Male 33.9
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 35.2
Sample A Female 44.2
Sample B Female 38.8
Sample C Male 40.9
Sample D Male 35.2
Subiculum
nTPM: 38.2
Samples: 4

Max nTPM: 49.6
Min nTPM: 31.0
Sample A Female 49.6
Sample B Female 31.0
Sample C Male 36.6
Sample D Male 35.5
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 52.6
Min nTPM: 27.0
Sample A Female 38.2
Sample B Female 27.0
Sample C Male 52.6
Sample D Male 45.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.7
Samples: 4

Max nTPM: 85.9
Min nTPM: 79.2
Sample A Male 85.9
Sample B Male 79.2
Sample C Female 85.6
Sample D Female 80.1
Hippocampal formation
nTPM: 88.5
Samples: 4

Max nTPM: 94.4
Min nTPM: 80.6
Sample A Male 85.9
Sample B Male 80.6
Sample C Female 94.4
Sample D Female 93.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
512767 Antisense, RP_040809_02_D05, Mouse strain C57BL/6J (56 days, male) 15.8

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