HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.2 nTPM
HPA:71.2 nTPM
GTEx:79.8 nTPM
FANTOM5:279.2 Scaled Tags Per Million
Pig:59.1 nTPM
Mouse:100.9 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040098Antibody CAB033576
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.2
Sample id Sample description nTPM
Hippocampus
nTPM: 64.3
1898 Male, age 80, left hemisphere 73.8
1855 Male, age 76, left hemisphere 64.8
2529 Female, age 94, left hemisphere 64.8
2621 Female, age 67, right hemisphere 63.1
1911 Female, age 85, right hemisphere 62.1
2148 Female, age 91, left hemisphere 57.3
Dentate gyrus
nTPM: 64.8
2528 Male, age 74, both hemispheres 70.9
1927 Female, age 91, both hemispheres 70.3
2010 Male, age 76, both hemispheres 69.2
2246 Female, age 85, both hemispheres 61.9
2530 Female, age 94, left hemisphere 61.2
2531 Female, age 67, both hemispheres 55.0
Entorhinal gyrus
nTPM: 62.7
1938 Female, age 85, left hemisphere 66.7
2764 Male, age 80, right hemisphere 65.5
1787 Male, age 76, left hemisphere 64.8
2117 Female, age 91, right hemisphere 63.6
2613 Female, age 94, left hemisphere 60.6
2686 Male, age 75, right hemisphere 54.8
Hippocampus, CA1
nTPM: 69.3
2749 Male, age 80, left hemisphere 82.1
2527 Male, age 74, both hemispheres 73.5
1873 Female, age 85, both hemispheres 70.5
2045 Male, age 76, both hemispheres 61.6
2082 Female, age 91, right hemisphere 58.5
Hippocampus, CA2
nTPM: 68.5
1892 Male, age 76, both hemispheres 80.1
2249 Male, age 74, both hemispheres 77.9
1963 Male, age 80, left hemisphere 70.9
1940 Female, age 85, left hemisphere 62.3
2437 Female, age 94, left hemisphere 60.2
2113 Female, age 91, right hemisphere 59.3
Hippocampus, CA3
nTPM: 67.4
2436 Male, age 74, both hemispheres 77.5
1867 Male, age 76, both hemispheres 75.5
2137 Male, age 80, left hemisphere 69.5
1891 Female, age 85, both hemispheres 67.5
2620 Female, age 94, left hemisphere 62.3
2861 Female, age 67, both hemispheres 52.3
Parahippocampal cortex
nTPM: 64.7
1850 Male, age 80, both hemispheres 73.7
1990 Female, age 91, right hemisphere 69.7
2250 Female, age 67, right hemisphere 69.2
1933 Female, age 85, both hemispheres 66.2
2245 Female, age 91, both hemispheres 64.2
2693 Female, age 94, both hemispheres 63.3
2018 Male, age 76, both hemispheres 63.0
2532 Female, age 72, left hemisphere 62.7
2692 Male, age 74, both hemispheres 60.5
2622 Female, age 67, right hemisphere 54.2
Perirhinal gyrus
nTPM: 71.2
1847 Female, age 91, left hemisphere 76.9
1841 Female, age 85, right hemisphere 73.2
1794 Male, age 80, right hemisphere 70.7
2521 Female, age 94, right hemisphere 70.3
2848 Male, age 76, right hemisphere 64.9
Subiculum
nTPM: 64.3
1901 Male, age 80, both hemispheres 68.3
1977 Female, age 85, both hemispheres 66.9
2438 Female, age 94, left hemisphere 66.2
2619 Male, age 74, both hemispheres 63.3
2042 Male, age 76, both hemispheres 61.5
2729 Female, age 91, right hemisphere 59.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.8
Samples: 197

Max nTPM: 152.3
Min nTPM: 34.6
Std nTPM: 19.9
Median nTPM: 79.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 152.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 134.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 130.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 128.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 120.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 119.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 118.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 117.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 117.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 114.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 279.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 279.2
FF:10169-103B7 60 years, female 372.5
FF:10153-102I9 76 years, female 186.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.1
Samples: 4

Max nTPM: 77.8
Min nTPM: 44.1
Sample A Female 77.8
Sample B Female 63.4
Sample C Male 51.1
Sample D Male 44.1
Entorhinal cortex
nTPM: 50.7
Samples: 4

Max nTPM: 61.0
Min nTPM: 38.8
Sample A Female 54.9
Sample B Female 61.0
Sample C Male 48.2
Sample D Male 38.8
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 66.7
Min nTPM: 45.0
Sample A Female 66.7
Sample B Female 52.5
Sample C Male 49.5
Sample D Male 45.0
Ventral hippocampus
nTPM: 55.8
Samples: 4

Max nTPM: 69.6
Min nTPM: 41.4
Sample A Female 54.9
Sample B Female 41.4
Sample C Male 57.3
Sample D Male 69.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.9
Samples: 4

Max nTPM: 105.4
Min nTPM: 97.1
Sample A Male 100.9
Sample B Male 97.1
Sample C Female 105.4
Sample D Female 100.0
Hippocampal formation
nTPM: 96.8
Samples: 4

Max nTPM: 107.5
Min nTPM: 89.1
Sample A Male 107.5
Sample B Male 89.1
Sample C Female 91.2
Sample D Female 99.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
79539640 Antisense, RP_071018_01_B11, Mouse strain C57BL/6J (56 days, male) 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.