HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.6 nTPM
HPA:45.6 nTPM
GTEx:37.0 nTPM
FANTOM5:36.5 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:65.6 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041345Antibody HPA041550
Glial cells MediumLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.6
Sample id Sample description nTPM
Hippocampus
nTPM: 43.7
1898 Male, age 80, left hemisphere 45.8
1855 Male, age 76, left hemisphere 45.0
2621 Female, age 67, right hemisphere 44.3
2529 Female, age 94, left hemisphere 43.9
2148 Female, age 91, left hemisphere 41.6
1911 Female, age 85, right hemisphere 41.3
Dentate gyrus
nTPM: 43.1
2010 Male, age 76, both hemispheres 44.8
2246 Female, age 85, both hemispheres 44.5
2528 Male, age 74, both hemispheres 43.5
2530 Female, age 94, left hemisphere 42.5
1927 Female, age 91, both hemispheres 42.4
2531 Female, age 67, both hemispheres 41.1
Entorhinal gyrus
nTPM: 42.5
1938 Female, age 85, left hemisphere 43.4
2764 Male, age 80, right hemisphere 43.2
2117 Female, age 91, right hemisphere 43.0
1787 Male, age 76, left hemisphere 42.9
2613 Female, age 94, left hemisphere 41.4
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 42.9
2749 Male, age 80, left hemisphere 44.5
2527 Male, age 74, both hemispheres 43.6
1873 Female, age 85, both hemispheres 42.8
2045 Male, age 76, both hemispheres 42.2
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 43.4
1892 Male, age 76, both hemispheres 45.5
2249 Male, age 74, both hemispheres 44.7
2113 Female, age 91, right hemisphere 43.2
2437 Female, age 94, left hemisphere 42.8
1940 Female, age 85, left hemisphere 42.7
1963 Male, age 80, left hemisphere 41.8
Hippocampus, CA3
nTPM: 42.8
2436 Male, age 74, both hemispheres 46.2
1867 Male, age 76, both hemispheres 44.2
1891 Female, age 85, both hemispheres 43.0
2137 Male, age 80, left hemisphere 42.5
2620 Female, age 94, left hemisphere 40.8
2861 Female, age 67, both hemispheres 40.0
Parahippocampal cortex
nTPM: 42.8
1850 Male, age 80, both hemispheres 45.7
1990 Female, age 91, right hemisphere 43.5
1933 Female, age 85, both hemispheres 43.3
2532 Female, age 72, left hemisphere 43.1
2245 Female, age 91, both hemispheres 42.7
2250 Female, age 67, right hemisphere 42.3
2692 Male, age 74, both hemispheres 42.0
2622 Female, age 67, right hemisphere 41.8
2693 Female, age 94, both hemispheres 41.8
2018 Male, age 76, both hemispheres 41.5
Perirhinal gyrus
nTPM: 45.6
1841 Female, age 85, right hemisphere 47.0
1794 Male, age 80, right hemisphere 46.4
1847 Female, age 91, left hemisphere 46.3
2521 Female, age 94, right hemisphere 44.5
2848 Male, age 76, right hemisphere 43.9
Subiculum
nTPM: 42.6
1977 Female, age 85, both hemispheres 44.1
2619 Male, age 74, both hemispheres 43.4
1901 Male, age 80, both hemispheres 42.9
2438 Female, age 94, left hemisphere 42.6
2042 Male, age 76, both hemispheres 41.5
2729 Female, age 91, right hemisphere 41.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.0
Samples: 197

Max nTPM: 66.4
Min nTPM: 24.8
Std nTPM: 6.3
Median nTPM: 36.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 66.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 63.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 61.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 58.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 50.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 48.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 47.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 47.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 46.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.5
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 66.6
Min nTPM: 40.1
Sample A Female 66.6
Sample B Female 50.8
Sample C Male 57.4
Sample D Male 40.1
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 50.9
Min nTPM: 34.8
Sample A Female 45.5
Sample B Female 50.9
Sample C Male 49.3
Sample D Male 34.8
Subiculum
nTPM: 47.1
Samples: 4

Max nTPM: 62.2
Min nTPM: 39.9
Sample A Female 62.2
Sample B Female 43.6
Sample C Male 39.9
Sample D Male 42.7
Ventral hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 59.8
Min nTPM: 38.0
Sample A Female 48.7
Sample B Female 38.0
Sample C Male 59.8
Sample D Male 49.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.4
Samples: 4

Max nTPM: 58.5
Min nTPM: 53.1
Sample A Male 53.1
Sample B Male 55.7
Sample C Female 58.5
Sample D Female 58.3
Hippocampal formation
nTPM: 65.6
Samples: 4

Max nTPM: 68.7
Min nTPM: 60.8
Sample A Male 65.8
Sample B Male 67.1
Sample C Female 68.7
Sample D Female 60.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
68546272 Antisense, RP_050120_02_C07, Mouse strain C57BL/6J (56 days, male) 16.7
68499524 Antisense, RP_050118_01_G04, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

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