AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		92.748
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:113.1 nTPM
HPA:113.1 nTPM
GTEx:85.0 nTPM
FANTOM5:159.1 Scaled Tags Per Million
Pig:151.2 nTPM
Mouse:482.8 nTPM
Allen mouse:32.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA008394
Amygdala mean intensity 92.748
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 92.748
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 89.197
Cortical amygdala 89.145
Central amygdala 79.003
Medial amygdaloid nucleus 62.835

AMYGDALA - HPA Brain RNA-seq
Max nTPM 113.1
Sample id Sample description nTPM
Amygdala
nTPM: 0.8
2814 Male, age 76, right hemisphere 4.1
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 17.7
2110 Male, age 80, left hemisphere 60.2
2243 Female, age 91, right hemisphere 46.1
1955 Male, age 76, both hemispheres 0.0
2609 Male, age 75, right hemisphere 0.0
2685 Female, age 94, left hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 0.6
1905 Male, age 76, both hemispheres 3.2
2239 Male, age 80, left hemisphere 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 3.6
2535 Female, age 67, right hemisphere 16.9
2242 Female, age 91, right hemisphere 4.9
2240 Male, age 76, both hemispheres 0.0
2428 Male, age 75, right hemisphere 0.0
2429 Female, age 94, left hemisphere 0.0
2829 Male, age 80, left hemisphere 0.0
Lateral amygdala
nTPM: 1.1
1883 Male, age 76, both hemispheres 7.1
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2534 Female, age 94, left hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 113.1
2486 Female, age 94, both hemispheres 193.6
1974 Female, age 91, both hemispheres 145.6
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 85.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 85.0
Samples: 152

Max nTPM: 266.9
Min nTPM: 1.0
Std nTPM: 56.3
Median nTPM: 80.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 266.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 241.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 239.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 228.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 206.8
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 204.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 192.8
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 177.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 174.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 174.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 172.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 159.1
FF:10151-102I7 76 years, female 159.1

AMYGDALA - Pig RNA-seqi
Average nTPM 151.2
Pig sample Sample description nTPM
Amygdala
nTPM: 151.2
Samples: 4

Max nTPM: 241.4
Min nTPM: 113.3
Sample A Female 241.4
Sample B Female 113.3
Sample C Male 134.7
Sample D Male 115.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 482.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 482.8
Samples: 4

Max nTPM: 518.9
Min nTPM: 445.8
Sample A Male 518.9
Sample B Male 445.8
Sample C Female 494.0
Sample D Female 472.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 32.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 32.7
1014 Antisense, RP_Baylor_103052, Mouse strain C57BL/6J (56 days, male) 32.7
1015 Antisense, RP_Baylor_103052, Mouse strain C57BL/6J (56 days, male) 32.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.