HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:100.8 nTPM
HPA:100.8 nTPM
GTEx:63.6 nTPM
FANTOM5:48.6 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:64.0 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004231
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.8
Sample id Sample description nTPM
Hippocampus
nTPM: 100.8
2529 Female, age 94, left hemisphere 126.5
1855 Male, age 76, left hemisphere 103.9
2148 Female, age 91, left hemisphere 103.6
1911 Female, age 85, right hemisphere 98.0
1898 Male, age 80, left hemisphere 95.1
2621 Female, age 67, right hemisphere 77.5
Dentate gyrus
nTPM: 89.0
2528 Male, age 74, both hemispheres 119.5
2246 Female, age 85, both hemispheres 98.2
2531 Female, age 67, both hemispheres 83.4
2530 Female, age 94, left hemisphere 78.9
2010 Male, age 76, both hemispheres 77.8
1927 Female, age 91, both hemispheres 76.1
Entorhinal gyrus
nTPM: 91.1
2117 Female, age 91, right hemisphere 101.2
2686 Male, age 75, right hemisphere 94.9
2764 Male, age 80, right hemisphere 93.7
1787 Male, age 76, left hemisphere 90.8
1938 Female, age 85, left hemisphere 88.2
2613 Female, age 94, left hemisphere 77.7
Hippocampus, CA1
nTPM: 91.8
2527 Male, age 74, both hemispheres 127.3
1873 Female, age 85, both hemispheres 104.6
2082 Female, age 91, right hemisphere 97.7
2045 Male, age 76, both hemispheres 68.8
2749 Male, age 80, left hemisphere 60.5
Hippocampus, CA2
nTPM: 86.0
2113 Female, age 91, right hemisphere 100.1
1963 Male, age 80, left hemisphere 92.3
2249 Male, age 74, both hemispheres 88.9
2437 Female, age 94, left hemisphere 88.4
1940 Female, age 85, left hemisphere 80.6
1892 Male, age 76, both hemispheres 65.8
Hippocampus, CA3
nTPM: 86.4
2861 Female, age 67, both hemispheres 122.1
1891 Female, age 85, both hemispheres 98.9
2436 Male, age 74, both hemispheres 86.3
2620 Female, age 94, left hemisphere 82.2
2137 Male, age 80, left hemisphere 65.7
1867 Male, age 76, both hemispheres 63.2
Parahippocampal cortex
nTPM: 90.4
2692 Male, age 74, both hemispheres 127.3
2622 Female, age 67, right hemisphere 103.3
1933 Female, age 85, both hemispheres 97.1
2250 Female, age 67, right hemisphere 91.5
2245 Female, age 91, both hemispheres 84.7
1850 Male, age 80, both hemispheres 83.9
2018 Male, age 76, both hemispheres 83.1
1990 Female, age 91, right hemisphere 83.0
2693 Female, age 94, both hemispheres 77.2
2532 Female, age 72, left hemisphere 72.5
Perirhinal gyrus
nTPM: 80.3
1794 Male, age 80, right hemisphere 89.1
1847 Female, age 91, left hemisphere 85.1
2521 Female, age 94, right hemisphere 81.7
1841 Female, age 85, right hemisphere 78.3
2848 Male, age 76, right hemisphere 67.3
Subiculum
nTPM: 93.2
2619 Male, age 74, both hemispheres 130.2
2729 Female, age 91, right hemisphere 111.7
1977 Female, age 85, both hemispheres 86.5
2438 Female, age 94, left hemisphere 83.0
1901 Male, age 80, both hemispheres 75.6
2042 Male, age 76, both hemispheres 72.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 189.0
Min nTPM: 10.1
Std nTPM: 34.5
Median nTPM: 56.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 189.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 178.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 175.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 156.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 149.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 149.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 144.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 138.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 136.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 133.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 133.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.6
FF:10153-102I9 76 years, female 66.8
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 16.2
Min nTPM: 15.0
Sample A Female 16.2
Sample B Female 16.1
Sample C Male 15.7
Sample D Male 15.0
Entorhinal cortex
nTPM: 27.7
Samples: 4

Max nTPM: 30.9
Min nTPM: 24.7
Sample A Female 25.9
Sample B Female 30.9
Sample C Male 29.2
Sample D Male 24.7
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 19.9
Sample A Female 32.2
Sample B Female 23.4
Sample C Male 24.6
Sample D Male 19.9
Ventral hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 35.1
Min nTPM: 18.4
Sample A Female 22.1
Sample B Female 20.8
Sample C Male 35.1
Sample D Male 18.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.0
Samples: 4

Max nTPM: 73.9
Min nTPM: 54.2
Sample A Male 67.7
Sample B Male 54.2
Sample C Female 73.9
Sample D Female 60.3
Hippocampal formation
nTPM: 55.7
Samples: 4

Max nTPM: 67.5
Min nTPM: 45.6
Sample A Male 59.4
Sample B Male 50.2
Sample C Female 45.6
Sample D Female 67.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
100146154 Antisense, RP_110421_02_D11, Mouse strain C57BL/6J (56 days, male) 1.6
448 Antisense, RP_Baylor_102781, Mouse strain C57BL/6J (56 days, male) 0.1

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