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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:115.2 nTPM
FANTOM5:151.7 Scaled Tags Per Million
Pig:89.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA011165Antibody CAB004573
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 115.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 115.2
Samples: 246

Max nTPM: 280.4
Min nTPM: 40.8
Std nTPM: 36.9
Median nTPM: 108.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 280.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 234.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 225.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 219.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 207.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 206.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 206.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 202.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 199.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 193.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 190.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 183.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 181.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 177.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 172.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 171.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 170.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 170.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 170.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 169.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 169.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 168.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 168.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 166.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 165.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 164.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 161.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 161.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 160.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 159.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 158.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 158.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 157.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 157.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 156.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 154.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 154.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 153.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 153.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 153.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 152.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 151.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 146.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 145.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 145.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 145.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 144.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 142.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 142.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 142.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 141.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 141.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 141.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 141.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 141.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 140.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 138.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 138.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 137.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 137.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 135.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 134.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 133.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 133.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 132.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 132.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 131.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 131.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 131.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 130.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 129.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 129.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 128.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 127.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 127.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 126.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 126.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 125.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 124.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 124.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 124.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 123.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 122.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 122.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 121.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 121.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 120.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 120.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 120.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 120.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 120.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 119.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 119.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 117.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 117.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 116.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 114.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 113.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 113.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 113.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 113.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 113.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 112.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 111.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 111.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 111.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 110.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 109.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 109.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 108.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 108.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 108.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 106.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 106.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 106.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 105.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 105.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 105.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 105.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 105.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 104.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 104.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 104.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 103.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 103.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 102.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 102.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 102.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 101.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 101.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 101.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 100.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 100.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 100.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 98.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 98.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 97.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 96.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 96.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 96.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 95.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 95.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 95.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 95.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 94.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 93.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 92.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 91.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 91.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 91.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 90.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 89.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 88.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 88.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 87.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 87.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 86.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 86.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 86.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 86.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 85.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 85.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 85.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 84.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 83.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 83.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 83.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 82.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 82.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 81.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 81.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 80.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 80.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 80.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 79.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 79.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 79.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 78.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 78.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 78.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 78.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 78.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 77.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 76.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 76.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 76.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 76.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 76.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 75.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 75.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 71.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 71.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 70.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 70.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 67.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 62.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 62.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 59.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 151.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 151.7
FF:10164-103B2 76 years, female 151.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 89.5
Pig sample Sample description nTPM
Caudate
nTPM: 89.6
Samples: 4

Max nTPM: 103.3
Min nTPM: 81.4
Sample A Female 83.9
Sample B Female 89.6
Sample C Male 103.3
Sample D Male 81.4

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