HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.1 nTPM
HPA:44.1 nTPM
GTEx:44.5 nTPM
FANTOM5:76.7 Scaled Tags Per Million
Pig:28.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000873
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 42.0
1898 Male, age 80, left hemisphere 48.0
2148 Female, age 91, left hemisphere 46.6
1855 Male, age 76, left hemisphere 45.6
2621 Female, age 67, right hemisphere 44.1
2529 Female, age 94, left hemisphere 34.8
1911 Female, age 85, right hemisphere 33.2
Dentate gyrus
nTPM: 44.1
2530 Female, age 94, left hemisphere 50.2
2531 Female, age 67, both hemispheres 46.3
1927 Female, age 91, both hemispheres 45.0
2528 Male, age 74, both hemispheres 43.0
2010 Male, age 76, both hemispheres 41.7
2246 Female, age 85, both hemispheres 38.7
Entorhinal gyrus
nTPM: 42.1
2613 Female, age 94, left hemisphere 46.8
2764 Male, age 80, right hemisphere 43.1
2686 Male, age 75, right hemisphere 42.1
1787 Male, age 76, left hemisphere 41.8
2117 Female, age 91, right hemisphere 39.9
1938 Female, age 85, left hemisphere 38.9
Hippocampus, CA1
nTPM: 41.6
2749 Male, age 80, left hemisphere 47.6
1873 Female, age 85, both hemispheres 45.4
2082 Female, age 91, right hemisphere 39.3
2527 Male, age 74, both hemispheres 38.7
2045 Male, age 76, both hemispheres 37.3
Hippocampus, CA2
nTPM: 41.4
1963 Male, age 80, left hemisphere 50.0
1892 Male, age 76, both hemispheres 47.6
2437 Female, age 94, left hemisphere 41.7
2113 Female, age 91, right hemisphere 37.5
1940 Female, age 85, left hemisphere 36.9
2249 Male, age 74, both hemispheres 34.4
Hippocampus, CA3
nTPM: 42.1
2861 Female, age 67, both hemispheres 59.0
2620 Female, age 94, left hemisphere 52.7
2137 Male, age 80, left hemisphere 38.1
1867 Male, age 76, both hemispheres 35.0
1891 Female, age 85, both hemispheres 34.0
2436 Male, age 74, both hemispheres 33.5
Parahippocampal cortex
nTPM: 38.6
2622 Female, age 67, right hemisphere 44.0
2692 Male, age 74, both hemispheres 41.6
1850 Male, age 80, both hemispheres 40.4
2693 Female, age 94, both hemispheres 39.3
1990 Female, age 91, right hemisphere 38.5
2532 Female, age 72, left hemisphere 37.8
2245 Female, age 91, both hemispheres 37.6
1933 Female, age 85, both hemispheres 37.5
2250 Female, age 67, right hemisphere 36.4
2018 Male, age 76, both hemispheres 32.7
Perirhinal gyrus
nTPM: 42.0
1794 Male, age 80, right hemisphere 45.6
1847 Female, age 91, left hemisphere 44.0
2521 Female, age 94, right hemisphere 41.7
1841 Female, age 85, right hemisphere 39.5
2848 Male, age 76, right hemisphere 39.2
Subiculum
nTPM: 36.2
2729 Female, age 91, right hemisphere 40.0
1977 Female, age 85, both hemispheres 38.5
2619 Male, age 74, both hemispheres 38.2
1901 Male, age 80, both hemispheres 35.1
2438 Female, age 94, left hemisphere 34.4
2042 Male, age 76, both hemispheres 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.5
Samples: 197

Max nTPM: 92.9
Min nTPM: 14.1
Std nTPM: 13.7
Median nTPM: 42.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 92.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 88.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 86.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 83.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 81.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 76.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 73.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 70.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 70.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 69.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 67.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.7
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 76.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 32.9
Min nTPM: 22.6
Sample A Female 32.9
Sample B Female 29.1
Sample C Male 26.2
Sample D Male 22.6
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 26.9
Min nTPM: 23.9
Sample A Female 26.0
Sample B Female 26.6
Sample C Male 26.9
Sample D Male 23.9
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 30.9
Min nTPM: 21.9
Sample A Female 30.9
Sample B Female 24.0
Sample C Male 23.2
Sample D Male 21.9
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 35.4
Min nTPM: 21.9
Sample A Female 27.9
Sample B Female 21.9
Sample C Male 35.4
Sample D Male 26.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.