COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:83.5 nTPM
HPA:43.0 nTPM
GTEx:83.5 nTPM
FANTOM5:108.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA024026
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPM 43.0
overview
Male, age 54 		Colon sample 67
nTPM: 40.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 29.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 35.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 36.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 18.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 45.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 39.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 80.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 37.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 39.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 52.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 38.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 64.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 83.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 70.2
Samples: 373

Max nTPM: 142.2
Min nTPM: 30.8
Std nTPM: 18.4
Median nTPM: 67.7
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 142.2
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 131.5
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 125.8
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 122.5
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 116.9
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 116.7
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 114.4
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 113.4
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 112.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 111.4
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 111.4
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Colon - Transverse
Average nTPM: 83.5
Samples: 406

Max nTPM: 193.5
Min nTPM: 35.6
Std nTPM: 28.9
Median nTPM: 78.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 193.5
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 183.6
GTEX-YEC3-2426-SM-DO11A 50-59 years, male 162.9
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 161.7
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 160.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 157.7
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 153.3
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 150.2
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 150.2
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 143.8
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 143.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 108.5
FF:10014-101C5 62,83,84 years, mixed 108.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.