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PABPC1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:73.4 nTPM
HPA:73.4 nTPM
GTEx:173.2 nTPM
FANTOM5:500.4 Scaled Tags Per Million
Mouse:123.3 nTPM
Allen mouse:9.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045423Antibody CAB011536
Glial cells LowLow
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 73.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.0
2846 Female, age 79, unknown 81.0
2289 Male, age 61, right hemisphere 71.3
2290 Female, age 72, unknown 56.5
1857 Female, age 85, left hemisphere 53.8
1781 Male, age 74, unknown 44.3
2288 Male, age 75, left hemisphere 36.3
1854 Male, age 80, left hemisphere 35.8
2481 Female, age 94, left hemisphere 12.8
Claustrum
nTPM: 43.9
2292 Female, age 85, both hemispheres 93.4
2196 Female, age 79, unknown 53.7
2645 Female, age 72, unknown 50.5
2284 Female, age 91, both hemispheres 45.7
2568 Male, age 61, both hemispheres 44.7
2198 Male, age 80, both hemispheres 44.2
1956 Male, age 74, unknown 36.1
2491 Male, age 75, both hemispheres 16.6
2392 Female, age 94, both hemispheres 10.1
Globus pallidus, externus
nTPM: 67.9
2646 Male, age 61, right hemisphere 97.3
2567 Female, age 72, unknown 87.6
2395 Male, age 75, both hemispheres 64.1
1996 Male, age 80, right hemisphere 61.5
2772 Female, age 79, unknown 28.9
Globus pallidus, internus
nTPM: 52.8
2566 Female, age 72, unknown 85.2
2037 Male, age 80, right hemisphere 56.7
1818 Male, age 74, unknown 52.0
2483 Female, age 94, right hemisphere 49.4
2111 Female, age 85, right hemisphere 45.4
2778 Female, age 91, both hemispheres 42.7
2287 Male, age 75, right hemisphere 38.4
Nucleus accumbens
nTPM: 43.3
2698 Female, age 72, unknown 107.3
1806 Female, age 85, left hemisphere 54.0
1783 Male, age 74, unknown 53.9
2732 Male, age 80, right hemisphere 50.6
2824 Male, age 61, right hemisphere 25.8
1856 Female, age 91, right hemisphere 19.9
2391 Female, age 94, left hemisphere 18.8
2286 Male, age 75, left hemisphere 16.6
Nucleus basalis of Meynert
nTPM: 73.4
2569 Male, age 61, both hemispheres 133.7
2821 Male, age 75, both hemispheres 73.7
2393 Male, age 80, right hemisphere 43.5
2484 Female, age 94, left hemisphere 42.9
Nucleus of the diagonal band
nTPM: 16.7
1812 Female, age 91, both hemispheres 23.9
1979 Male, age 74, unknown 23.4
2195 Female, age 85, both hemispheres 23.3
2775 Male, age 80, right hemisphere 9.1
2029 Male, age 61, right hemisphere 3.9
Olfactory tubercle
nTPM: 12.9
1846 Male, age 80, right hemisphere 19.9
2487 Female, age 94, left hemisphere 18.7
2856 Male, age 75, right hemisphere 13.0
1998 Female, age 91, both hemispheres 0.0
Putamen
nTPM: 45.7
2489 Female, age 72, unknown 83.7
2647 Male, age 75, left hemisphere 63.7
1838 Male, age 80, right hemisphere 54.4
1829 Male, age 74, unknown 52.7
2482 Female, age 94, left hemisphere 29.6
1937 Female, age 91, right hemisphere 23.8
2466 Female, age 79, unknown 12.0
Septal nuclei
nTPM: 26.1
2629 Female, age 94, right hemisphere 54.5
2199 Male, age 80, right hemisphere 37.2
2394 Male, age 61, left hemisphere 36.8
2059 Female, age 85, both hemispheres 33.9
1960 Male, age 74, unknown 8.2
2009 Female, age 91, both hemispheres 7.7
2031 Female, age 72, unknown 4.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 173.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 137.0
Samples: 246

Max nTPM: 268.9
Min nTPM: 88.9
Std nTPM: 28.5
Median nTPM: 132.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 268.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 261.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 232.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 220.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 204.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 202.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 201.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 201.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 199.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 198.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 197.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 193.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 191.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 188.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 188.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 186.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 186.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 185.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 180.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 176.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 176.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 174.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 174.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 172.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 172.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 172.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 171.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 171.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 169.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 169.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 169.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 168.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 168.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 168.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 167.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 163.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 162.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 161.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 161.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 161.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 160.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 160.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 159.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 159.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 159.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 158.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 158.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 156.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 156.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 154.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 154.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 154.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 154.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 154.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 153.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 153.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 153.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 153.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 153.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 152.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 151.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 151.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 150.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 149.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 149.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 149.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 149.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 149.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 148.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 148.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 148.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 146.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 146.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 146.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 145.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 145.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 145.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 145.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 144.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 142.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 142.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 142.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 142.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 142.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 142.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 141.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 141.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 141.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 141.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 140.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 140.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 139.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 139.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 139.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 139.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 138.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 138.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 138.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 137.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 137.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 137.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 136.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 136.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 136.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 135.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 135.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 134.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 134.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 134.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 134.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 134.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 133.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 132.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 132.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 132.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 132.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 132.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 132.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 132.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 131.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 131.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 130.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 130.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 130.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 129.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 129.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 129.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 128.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 128.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 128.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 128.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 128.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 127.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 127.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 127.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 126.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 126.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 126.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 125.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 125.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 125.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 125.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 125.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 124.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 124.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 124.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 124.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 124.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 124.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 124.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 124.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 123.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 123.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 123.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 122.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 122.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 122.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 121.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 121.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 121.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 121.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 121.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 121.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 121.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 120.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 120.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 120.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 119.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 119.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 119.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 119.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 118.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 118.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 117.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 117.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 116.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 116.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 116.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 115.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 115.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 115.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 114.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 113.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 113.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 113.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 112.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 112.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 112.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 110.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 110.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 109.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 109.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 108.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 107.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 107.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 106.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 105.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 105.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 104.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 104.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 104.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 103.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 102.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 101.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 101.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 101.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 101.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 101.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 100.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 99.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 99.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 99.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 96.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 94.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 94.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 92.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 91.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 88.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 173.2
Samples: 246

Max nTPM: 313.9
Min nTPM: 69.4
Std nTPM: 37.6
Median nTPM: 168.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 313.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 287.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 286.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 285.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 265.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 264.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 254.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 251.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 246.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 242.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 241.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 239.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 238.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 238.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 237.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 237.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 236.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 236.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 233.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 233.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 229.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 228.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 226.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 225.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 224.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 223.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 222.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 221.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 221.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 220.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 219.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 219.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 219.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 219.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 217.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 217.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 216.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 215.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 214.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 211.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 210.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 209.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 207.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 206.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 206.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 204.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 204.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 204.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 202.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 201.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 200.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 199.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 199.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 198.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 198.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 197.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 196.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 195.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 195.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 194.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 194.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 194.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 194.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 193.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 193.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 193.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 193.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 192.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 192.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 191.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 190.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 188.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 186.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 185.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 185.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 185.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 185.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 184.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 184.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 183.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 182.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 182.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 182.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 181.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 181.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 181.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 180.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 180.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 180.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 179.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 178.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 178.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 178.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 178.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 177.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 177.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 177.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 176.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 176.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 176.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 176.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 176.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 176.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 175.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 174.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 174.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 174.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 173.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 172.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 172.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 172.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 172.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 172.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 172.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 171.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 171.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 171.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 171.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 170.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 170.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 169.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 169.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 168.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 168.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 168.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 167.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 167.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 167.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 167.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 167.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 166.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 166.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 166.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 165.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 165.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 165.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 165.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 164.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 163.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 163.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 162.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 161.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 160.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 160.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 160.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 160.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 160.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 159.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 159.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 159.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 158.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 158.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 158.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 158.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 158.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 158.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 157.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 157.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 157.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 156.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 155.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 154.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 154.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 154.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 152.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 152.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 152.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 151.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 151.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 150.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 150.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 150.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 149.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 149.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 149.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 148.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 148.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 146.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 146.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 146.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 146.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 146.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 145.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 145.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 145.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 145.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 145.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 144.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 144.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 144.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 143.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 142.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 141.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 140.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 140.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 140.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 140.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 139.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 139.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 139.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 139.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 139.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 138.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 138.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 138.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 137.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 137.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 137.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 137.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 136.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 136.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 136.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 136.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 135.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 135.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 134.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 134.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 133.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 133.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 131.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 130.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 130.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 130.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 129.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 128.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 128.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 127.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 127.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 127.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 127.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 125.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 125.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 124.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 124.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 123.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 121.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 120.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 116.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 114.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 112.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 111.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 111.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 105.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 69.4
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Brain - Putamen (basal ganglia)
Average nTPM: 139.9
Samples: 205

Max nTPM: 277.1
Min nTPM: 92.4
Std nTPM: 26.8
Median nTPM: 136.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 277.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 226.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 223.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 204.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 201.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 197.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 196.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 194.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 194.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 194.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 193.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 188.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 187.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 185.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 183.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 183.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 182.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 180.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 174.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 173.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 173.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 171.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 170.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 168.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 167.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 167.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 167.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 166.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 164.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 163.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 162.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 162.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 161.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 161.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 160.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 160.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 160.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 160.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 159.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 159.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 158.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 158.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 158.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 158.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 157.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 156.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 156.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 155.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 154.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 153.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 153.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 153.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 153.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 152.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 152.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 152.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 152.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 151.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 151.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 151.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 150.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 149.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 149.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 149.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 148.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 148.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 148.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 147.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 147.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 147.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 146.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 146.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 146.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 146.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 145.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 145.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 144.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 144.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 144.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 143.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 142.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 142.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 142.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 142.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 141.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 141.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 141.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 141.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 140.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 140.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 140.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 140.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 139.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 138.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 138.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 138.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 138.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 137.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 137.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 137.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 137.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 136.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 136.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 136.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 136.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 135.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 135.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 135.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 134.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 134.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 134.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 134.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 133.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 132.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 132.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 132.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 132.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 131.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 131.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 131.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 131.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 130.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 130.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 130.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 129.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 129.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 129.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 129.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 128.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 128.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 128.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 127.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 127.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 127.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 126.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 126.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 125.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 125.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 125.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 125.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 125.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 124.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 124.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 124.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 123.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 123.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 123.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 123.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 123.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 123.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 123.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 122.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 122.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 122.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 121.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 121.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 121.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 120.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 120.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 120.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 119.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 119.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 119.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 119.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 119.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 118.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 118.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 118.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 117.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 117.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 117.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 115.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 115.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 114.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 114.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 114.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 114.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 112.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 110.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 109.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 109.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 109.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 107.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 107.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 106.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 106.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 105.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 104.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 104.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 104.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 103.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 102.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 102.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 102.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 101.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 101.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 101.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 100.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 98.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 96.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 95.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 92.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 500.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 445.9
FF:10164-103B2 76 years, female 445.9
Globus pallidus
Scaled Tags Per Million: 474.9
FF:10161-103A8 76 years, female 539.5
FF:10175-103C4 60 years, female 410.4
Nucleus accumbens
Scaled Tags Per Million: 377.4
FF:10037-101F1 23-56 years, mixed 377.4
Putamen
Scaled Tags Per Million: 500.4
FF:10176-103C5 60 years, female 500.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 123.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 123.3
Samples: 4

Max nTPM: 136.9
Min nTPM: 115.7
Sample A Male 115.7
Sample B Male 119.9
Sample C Female 120.8
Sample D Female 136.9
Septum
nTPM: 73.7
Samples: 4

Max nTPM: 76.3
Min nTPM: 71.1
Sample A Male 71.6
Sample B Male 76.3
Sample C Female 71.1
Sample D Female 75.8
Ventral forebrain
nTPM: 99.6
Samples: 4

Max nTPM: 113.8
Min nTPM: 89.4
Sample A Male 96.6
Sample B Male 89.4
Sample C Female 113.8
Sample D Female 98.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.1
71616794 Antisense, RP_050927_02_G10, Mouse strain C57BL/6J (56 days, male) 9.1
Pallidum
Expression energy: 6.3
71616794 Antisense, RP_050927_02_G10, Mouse strain C57BL/6J (56 days, male) 6.3

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