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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 178.4
Min nTPM: 26.3
Std nTPM: 28.9
Median nTPM:
218_1
71 years, female
178.4
353_1
82 years, female
135.3
355_1
70 years, female
132.1
173_1
67 years, male
128.1
491_1
89 years, female
127.5
379_1
60 years, male
126.9
321_1
62 years, female
126.4
452_1
88 years, female
124.8
319_1
81 years, male
123.5
354_1
81 years, female
123.2
384_1
83 years, male
122.5
318_1
68 years, male
120.9
349_1
83 years, male
116.9
350_1
84 years, female
116.7
317_1
60 years, male
113.2
295_1
61 years, female
112.4
352_1
62 years, male
110.9
375_1
74 years, female
110.8
376_1
75 years, female
110.6
320_1
89 years, female
110.3
172_1
72 years, female
107.3
386_1
76 years, male
104.3
177_1
74 years, male
102.7
41_1
94 years, female
102.4
425_1
59 years, female
102.2
377_1
82 years, female
101.0
322_1
76 years, male
100.9
351_1
91 years, male
100.6
229_1
69 years, female
99.2
291_1
76 years, male
98.0
347_1
72 years, male
97.6
447_1
81 years, male
97.4
389_1
86 years, female
97.0
406_1
79 years, male
96.6
335_1
73 years, female
95.2
348_1
84 years, male
95.2
405_1
91 years, male
93.3
356_1
87 years, female
93.2
243_1
75 years, male
92.4
292_1
71 years, male
91.9
311_1
78 years, male
91.6
316_1
62 years, male
90.1
237_1
82 years, male
89.8
490_1
67 years, female
88.6
394_1
75 years, female
88.0
293_1
68 years, female
86.6
286_1
68 years, female
85.0
404_1
82 years, female
84.1
246_1
77 years, male
83.4
506_1
65 years, male
81.2
163_1
78 years, male
79.9
254_1
77 years, female
76.5
251_1
78 years, male
76.4
307_1
66 years, female
76.4
6_1
73 years, female
72.0
324_1
76 years, male
72.0
189_1
76 years, male
71.8
396_1
62 years, male
67.9
468_1
89 years, male
67.4
264_1
73 years, female
67.1
503_1
68 years, male
67.1
495_1
57 years, female
67.0
120_1
70 years, female
66.5
266_1
85 years, male
66.5
480_1
63 years, male
65.8
415_1
77 years, female
65.6
526_1
61 years, male
65.3
217_1
76 years, male
63.3
145_1
84 years, male
61.4
308_1
70 years, female
60.4
314_1
67 years, male
59.8
265_1
87 years, male
59.0
99_1
64 years, male
58.7
126_1
63 years, male
58.7
137_1
83 years, male
58.6
119_1
70 years, female
58.1
4_1
88 years, female
57.9
35_1
74 years, female
57.8
115_1
83 years, male
56.9
518_1
75 years, female
56.0
43_1
64 years, female
55.4
466_1
57 years, female
55.2
413_1
59 years, female
55.1
414_1
84 years, female
55.1
288_1
66 years, female
53.8
315_1
62 years, female
51.7
18_1
88 years, male
51.5
517_1
88 years, male
51.1
17_1
71 years, male
50.6
153_1
70 years, female
48.7
89_1
63 years, male
48.5
139_1
64 years, female
48.4
117_1
61 years, male
46.0
109_1
81 years, female
45.4
499_1
55 years, female
44.8
2_1
77 years, female
44.5
81_1
67 years, male
44.0
149_1
88 years, male
44.0
142_1
61 years, female
43.1
162_1
79 years, female
40.4
501_1
88 years, male
39.6
32_1
67 years, male
36.1
9_1
66 years, female
35.5
313_1
79 years, female
34.7
42_1
85 years, male
26.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
