HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:141.1 nTPM
FANTOM5:414.9 Scaled Tags Per Million
Mouse:97.9 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045423Antibody CAB011536
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 35.3
2621 Female, age 67, right hemisphere 60.6
1855 Male, age 76, left hemisphere 44.9
2529 Female, age 94, left hemisphere 29.5
2148 Female, age 91, left hemisphere 27.8
1898 Male, age 80, left hemisphere 24.6
1911 Female, age 85, right hemisphere 24.6
Dentate gyrus
nTPM: 29.5
2531 Female, age 67, both hemispheres 45.5
2530 Female, age 94, left hemisphere 43.2
2010 Male, age 76, both hemispheres 35.9
2246 Female, age 85, both hemispheres 31.7
2528 Male, age 74, both hemispheres 18.2
1927 Female, age 91, both hemispheres 2.3
Entorhinal gyrus
nTPM: 33.5
1787 Male, age 76, left hemisphere 48.8
2686 Male, age 75, right hemisphere 43.4
2613 Female, age 94, left hemisphere 34.9
2117 Female, age 91, right hemisphere 29.8
1938 Female, age 85, left hemisphere 23.0
2764 Male, age 80, right hemisphere 20.9
Hippocampus, CA1
nTPM: 21.3
2045 Male, age 76, both hemispheres 41.3
1873 Female, age 85, both hemispheres 22.2
2082 Female, age 91, right hemisphere 16.7
2527 Male, age 74, both hemispheres 13.5
2749 Male, age 80, left hemisphere 12.7
Hippocampus, CA2
nTPM: 18.7
1940 Female, age 85, left hemisphere 36.0
2437 Female, age 94, left hemisphere 26.5
2113 Female, age 91, right hemisphere 20.8
1892 Male, age 76, both hemispheres 14.9
1963 Male, age 80, left hemisphere 8.2
2249 Male, age 74, both hemispheres 5.6
Hippocampus, CA3
nTPM: 28.7
2861 Female, age 67, both hemispheres 65.8
2620 Female, age 94, left hemisphere 35.3
1867 Male, age 76, both hemispheres 31.2
2436 Male, age 74, both hemispheres 23.9
1891 Female, age 85, both hemispheres 8.3
2137 Male, age 80, left hemisphere 7.4
Parahippocampal cortex
nTPM: 28.7
2622 Female, age 67, right hemisphere 59.9
2532 Female, age 72, left hemisphere 45.6
2018 Male, age 76, both hemispheres 36.7
2692 Male, age 74, both hemispheres 35.5
2245 Female, age 91, both hemispheres 33.9
2250 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 17.9
1850 Male, age 80, both hemispheres 15.6
1933 Female, age 85, both hemispheres 14.2
1990 Female, age 91, right hemisphere 1.4
Perirhinal gyrus
nTPM: 19.1
2848 Male, age 76, right hemisphere 29.0
2521 Female, age 94, right hemisphere 26.3
1794 Male, age 80, right hemisphere 20.1
1847 Female, age 91, left hemisphere 13.6
1841 Female, age 85, right hemisphere 6.6
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 60.9
2619 Male, age 74, both hemispheres 43.0
2438 Female, age 94, left hemisphere 27.6
2729 Female, age 91, right hemisphere 26.8
1901 Male, age 80, both hemispheres 22.0
1977 Female, age 85, both hemispheres 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 141.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 141.1
Samples: 197

Max nTPM: 303.7
Min nTPM: 75.1
Std nTPM: 46.3
Median nTPM: 128.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 303.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 299.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 287.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 286.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 280.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 263.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 256.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 246.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 245.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 242.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 237.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 414.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 414.9
FF:10153-102I9 76 years, female 455.2
FF:10169-103B7 60 years, female 374.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.6
Samples: 4

Max nTPM: 93.8
Min nTPM: 83.5
Sample A Male 88.2
Sample B Male 83.5
Sample C Female 92.8
Sample D Female 93.8
Hippocampal formation
nTPM: 97.9
Samples: 4

Max nTPM: 101.6
Min nTPM: 94.4
Sample A Male 95.2
Sample B Male 100.5
Sample C Female 101.6
Sample D Female 94.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
71616794 Antisense, RP_050927_02_G10, Mouse strain C57BL/6J (56 days, male) 14.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.