HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:11.1 nTPM
FANTOM5:46.8 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:43.1 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
1898 Male, age 80, left hemisphere 19.5
2529 Female, age 94, left hemisphere 19.3
2621 Female, age 67, right hemisphere 19.1
1911 Female, age 85, right hemisphere 18.8
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.7
Dentate gyrus
nTPM: 18.5
2010 Male, age 76, both hemispheres 19.5
2530 Female, age 94, left hemisphere 19.1
1927 Female, age 91, both hemispheres 18.4
2246 Female, age 85, both hemispheres 18.0
2528 Male, age 74, both hemispheres 17.9
2531 Female, age 67, both hemispheres 17.9
Entorhinal gyrus
nTPM: 19.7
2764 Male, age 80, right hemisphere 20.8
1938 Female, age 85, left hemisphere 19.8
2613 Female, age 94, left hemisphere 19.8
1787 Male, age 76, left hemisphere 19.6
2117 Female, age 91, right hemisphere 19.2
2686 Male, age 75, right hemisphere 19.0
Hippocampus, CA1
nTPM: 18.9
1873 Female, age 85, both hemispheres 20.2
2749 Male, age 80, left hemisphere 20.0
2045 Male, age 76, both hemispheres 18.6
2527 Male, age 74, both hemispheres 18.3
2082 Female, age 91, right hemisphere 17.4
Hippocampus, CA2
nTPM: 18.9
1940 Female, age 85, left hemisphere 19.8
1892 Male, age 76, both hemispheres 19.5
2249 Male, age 74, both hemispheres 19.5
1963 Male, age 80, left hemisphere 18.9
2437 Female, age 94, left hemisphere 18.0
2113 Female, age 91, right hemisphere 17.7
Hippocampus, CA3
nTPM: 19.0
2620 Female, age 94, left hemisphere 19.6
1867 Male, age 76, both hemispheres 19.5
1891 Female, age 85, both hemispheres 19.0
2436 Male, age 74, both hemispheres 18.9
2137 Male, age 80, left hemisphere 18.5
2861 Female, age 67, both hemispheres 18.3
Parahippocampal cortex
nTPM: 19.2
2622 Female, age 67, right hemisphere 20.4
1850 Male, age 80, both hemispheres 20.1
1933 Female, age 85, both hemispheres 19.8
1990 Female, age 91, right hemisphere 19.5
2018 Male, age 76, both hemispheres 19.3
2532 Female, age 72, left hemisphere 19.0
2692 Male, age 74, both hemispheres 18.9
2250 Female, age 67, right hemisphere 18.8
2245 Female, age 91, both hemispheres 18.6
2693 Female, age 94, both hemispheres 17.8
Perirhinal gyrus
nTPM: 20.0
1841 Female, age 85, right hemisphere 20.7
1847 Female, age 91, left hemisphere 20.7
1794 Male, age 80, right hemisphere 20.1
2848 Male, age 76, right hemisphere 19.5
2521 Female, age 94, right hemisphere 19.1
Subiculum
nTPM: 18.8
1977 Female, age 85, both hemispheres 19.8
2619 Male, age 74, both hemispheres 19.4
1901 Male, age 80, both hemispheres 18.6
2042 Male, age 76, both hemispheres 18.5
2729 Female, age 91, right hemisphere 18.5
2438 Female, age 94, left hemisphere 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 20.4
Min nTPM: 4.1
Std nTPM: 2.7
Median nTPM: 11.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 20.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 19.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 15.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 15.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 14.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.8
FF:10153-102I9 76 years, female 59.1
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 19.9
Min nTPM: 14.3
Sample A Female 19.9
Sample B Female 18.0
Sample C Male 16.1
Sample D Male 14.3
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 19.3
Min nTPM: 17.2
Sample A Female 19.3
Sample B Female 19.0
Sample C Male 17.9
Sample D Male 17.2
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 19.3
Min nTPM: 15.1
Sample A Female 19.3
Sample B Female 15.7
Sample C Male 15.6
Sample D Male 15.1
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.9
Sample A Female 17.7
Sample B Female 13.9
Sample C Male 17.9
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.0
Sample A Male 44.4
Sample B Male 43.4
Sample C Female 37.0
Sample D Female 47.5
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 43.2
Min nTPM: 40.4
Sample A Male 40.8
Sample B Male 43.2
Sample C Female 41.6
Sample D Female 40.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70524283 Antisense, RP_050316_01_B06, Mouse strain C57BL/6J (56 days, male) 1.2

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