We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FAM50A
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • FAM50A
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:63.2 nTPM
HPA:63.2 nTPM
GTEx:55.7 nTPM
FANTOM5:89.1 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:21.3 nTPM
Allen mouse:7.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003585
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 63.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 57.5
2481 Female, age 94, left hemisphere 61.2
2288 Male, age 75, left hemisphere 59.8
1781 Male, age 74, unknown 58.1
2846 Female, age 79, unknown 57.9
2289 Male, age 61, right hemisphere 57.0
2290 Female, age 72, unknown 56.6
1857 Female, age 85, left hemisphere 55.2
1854 Male, age 80, left hemisphere 54.4
Claustrum
nTPM: 61.0
2292 Female, age 85, both hemispheres 64.8
1956 Male, age 74, unknown 64.3
2491 Male, age 75, both hemispheres 61.8
2198 Male, age 80, both hemispheres 61.5
2645 Female, age 72, unknown 60.9
2284 Female, age 91, both hemispheres 59.6
2568 Male, age 61, both hemispheres 59.5
2196 Female, age 79, unknown 59.4
2392 Female, age 94, both hemispheres 57.3
Globus pallidus, externus
nTPM: 61.9
1996 Male, age 80, right hemisphere 63.5
2646 Male, age 61, right hemisphere 62.0
2772 Female, age 79, unknown 61.9
2395 Male, age 75, both hemispheres 61.3
2567 Female, age 72, unknown 60.9
Globus pallidus, internus
nTPM: 63.2
2111 Female, age 85, right hemisphere 65.2
2483 Female, age 94, right hemisphere 64.4
2287 Male, age 75, right hemisphere 64.1
2566 Female, age 72, unknown 63.9
2778 Female, age 91, both hemispheres 62.1
1818 Male, age 74, unknown 61.4
2037 Male, age 80, right hemisphere 61.0
Nucleus accumbens
nTPM: 55.7
2391 Female, age 94, left hemisphere 58.6
2698 Female, age 72, unknown 57.8
2286 Male, age 75, left hemisphere 57.2
2732 Male, age 80, right hemisphere 56.0
1783 Male, age 74, unknown 55.5
1806 Female, age 85, left hemisphere 54.1
1856 Female, age 91, right hemisphere 53.7
2824 Male, age 61, right hemisphere 52.8
Nucleus basalis of Meynert
nTPM: 59.4
2569 Male, age 61, both hemispheres 62.4
2821 Male, age 75, both hemispheres 61.2
2484 Female, age 94, left hemisphere 58.4
2393 Male, age 80, right hemisphere 55.8
Nucleus of the diagonal band
nTPM: 55.5
2029 Male, age 61, right hemisphere 55.9
1979 Male, age 74, unknown 55.5
2775 Male, age 80, right hemisphere 55.5
1812 Female, age 91, both hemispheres 55.4
2195 Female, age 85, both hemispheres 55.1
Olfactory tubercle
nTPM: 56.3
1998 Female, age 91, both hemispheres 57.3
2487 Female, age 94, left hemisphere 56.6
1846 Male, age 80, right hemisphere 55.6
2856 Male, age 75, right hemisphere 55.5
Putamen
nTPM: 58.0
2482 Female, age 94, left hemisphere 61.7
2647 Male, age 75, left hemisphere 60.6
2489 Female, age 72, unknown 60.5
1829 Male, age 74, unknown 58.2
2466 Female, age 79, unknown 56.4
1937 Female, age 91, right hemisphere 54.9
1838 Male, age 80, right hemisphere 53.6
Septal nuclei
nTPM: 56.4
2059 Female, age 85, both hemispheres 57.3
2199 Male, age 80, right hemisphere 56.9
2394 Male, age 61, left hemisphere 56.7
1960 Male, age 74, unknown 56.5
2031 Female, age 72, unknown 56.1
2629 Female, age 94, right hemisphere 56.1
2009 Female, age 91, both hemispheres 55.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 55.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.0
Samples: 246

Max nTPM: 92.3
Min nTPM: 24.1
Std nTPM: 10.1
Median nTPM: 45.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 80.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 76.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 76.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 73.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 69.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 65.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 64.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 64.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 64.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 63.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 63.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 62.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 61.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 61.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 61.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 60.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 60.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 60.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 59.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 59.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 59.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 59.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 58.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 58.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 58.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 57.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 57.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 56.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 55.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 55.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 55.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 54.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 54.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 54.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 54.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 54.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 53.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 53.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 53.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 53.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 53.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 53.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 52.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 52.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 52.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 52.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 52.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 51.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 51.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 51.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 51.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 51.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 51.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 51.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 51.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 50.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 50.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 49.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 49.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 49.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 49.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 49.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 49.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 48.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 48.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 48.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 48.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 48.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 47.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 47.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 47.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 47.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 47.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 46.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 46.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 46.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 46.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 46.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 45.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 45.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 45.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 45.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 45.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 44.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 44.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 44.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 44.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 44.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 44.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 44.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 44.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 44.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 44.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 44.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 44.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 43.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 43.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 43.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 43.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 43.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 43.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 43.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 42.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 42.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 42.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 42.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 41.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 41.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 41.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 41.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 41.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 41.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 41.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 41.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 41.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 41.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 40.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 40.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 40.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 40.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 40.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 40.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 40.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 40.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 39.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 39.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 39.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 39.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 39.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 39.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 39.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 38.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 38.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 38.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 37.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 37.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 37.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 37.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 37.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 36.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 36.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 36.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 36.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 35.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 35.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 34.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 34.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 34.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 34.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 33.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 33.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 33.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 33.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 32.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 32.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 31.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 28.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 41.9
Samples: 246

Max nTPM: 77.6
Min nTPM: 21.1
Std nTPM: 10.2
Median nTPM: 40.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 77.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 77.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 74.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 71.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 68.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 67.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 66.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 65.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 63.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 63.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 60.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 59.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 59.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 59.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 58.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 58.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 57.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 57.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 57.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 56.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 56.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 55.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 55.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 55.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 55.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 55.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 55.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 55.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 54.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 53.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 53.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 52.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 52.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 52.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 52.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 51.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 50.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 50.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 50.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 50.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 49.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 49.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 49.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 49.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 49.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 48.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 48.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 48.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 48.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 48.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 48.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 47.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 47.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 47.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 47.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 47.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 47.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 47.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 47.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 47.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 46.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 46.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 46.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 46.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 45.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 45.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 45.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 45.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 45.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 44.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 44.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 44.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 44.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 43.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 43.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 43.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 42.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 42.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 42.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 42.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 42.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 42.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 42.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 42.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 41.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 41.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 41.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 41.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 40.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 40.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 40.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 40.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 40.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 40.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 40.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 39.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 39.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 39.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 39.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 39.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 39.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 39.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 39.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 39.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 38.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 38.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 38.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 38.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 38.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 38.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 38.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 37.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 37.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 37.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 37.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 37.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 37.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 36.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 36.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 36.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 36.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 36.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 36.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 36.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 36.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 36.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 36.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 35.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 35.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 35.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 35.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 35.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 35.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 35.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 35.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 34.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 34.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 34.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 34.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 34.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 34.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 34.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 34.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 34.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 34.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 34.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 34.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 34.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 33.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 33.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 33.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 33.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 33.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 33.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 33.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 32.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 32.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 32.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 32.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 32.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 32.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 32.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 32.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 32.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 31.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 31.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 31.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 31.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 31.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 31.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 31.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 31.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 31.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 31.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 30.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 30.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 30.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 30.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 29.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 29.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 29.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 29.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 29.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 29.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 28.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 28.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 28.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 28.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 28.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 28.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 27.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 27.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 26.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 25.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 25.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 24.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 24.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 55.7
Samples: 205

Max nTPM: 112.9
Min nTPM: 19.9
Std nTPM: 12.1
Median nTPM: 56.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 112.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 103.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 90.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 89.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 88.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 79.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 78.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 77.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 77.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 77.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 75.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 71.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 71.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 70.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 70.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 69.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 69.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 69.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 68.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 68.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 68.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 67.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 67.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 67.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 67.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 66.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 66.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 65.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 65.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 65.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 65.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 65.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 65.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 64.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 64.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 64.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 64.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 64.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 63.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 63.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 63.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 62.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 61.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 60.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 60.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 60.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 60.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 60.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 59.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 59.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 59.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 59.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 58.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 58.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 58.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 58.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 58.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 58.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 58.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 58.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 58.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 58.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 57.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 57.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 57.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 57.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 57.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 57.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 57.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 56.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 56.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 56.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 56.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 56.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 56.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 56.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 56.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 56.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 56.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 56.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 56.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 56.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 55.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 55.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 55.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 55.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 54.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 54.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 54.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 54.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 53.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 53.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 53.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 53.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 53.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 53.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 53.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 53.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 53.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 53.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 52.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 52.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 51.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 51.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 51.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 51.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 50.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 50.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 50.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 49.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 49.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 49.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 49.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 48.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 48.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 48.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 47.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 47.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 47.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 46.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 46.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 46.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 46.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 45.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 45.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 45.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 44.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 44.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 44.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 42.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 42.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 42.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 42.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 42.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 42.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 42.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 41.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 41.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 40.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 40.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 39.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 38.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 38.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 37.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 29.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 24.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 19.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 89.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 84.8
FF:10164-103B2 76 years, female 84.8
Globus pallidus
Scaled Tags Per Million: 89.1
FF:10161-103A8 76 years, female 125.3
FF:10175-103C4 60 years, female 52.8
Nucleus accumbens
Scaled Tags Per Million: 44.3
FF:10037-101F1 23-56 years, mixed 44.3
Putamen
Scaled Tags Per Million: 62.4
FF:10176-103C5 60 years, female 62.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 18.3
Pig sample Sample description nTPM
Caudate
nTPM: 16.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 15.2
Sample C Male 19.4
Sample D Male 15.2
Putamen
nTPM: 18.3
Samples: 4

Max nTPM: 22.5
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 16.2
Sample C Male 22.5
Sample D Male 19.5
Septum
nTPM: 15.1
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.6
Sample A Female 15.4
Sample B Female 14.9
Sample C Male 12.6
Sample D Male 17.6
Ventral pallidum
nTPM: 16.4
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.9
Sample A Female 13.9
Sample B Female 17.5
Sample C Male 17.8
Sample D Male 16.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 21.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 18.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 17.3
Sample A Male 20.3
Sample B Male 17.3
Sample C Female 18.8
Sample D Female 19.0
Septum
nTPM: 20.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.8
Sample A Male 23.6
Sample B Male 20.1
Sample C Female 19.0
Sample D Female 18.8
Ventral forebrain
nTPM: 21.4
Samples: 4

Max nTPM: 23.9
Min nTPM: 19.9
Sample A Male 23.9
Sample B Male 21.4
Sample C Female 20.2
Sample D Female 19.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.1
74882206 Antisense, RP_060315_04_E05, Mouse strain C57BL/6J (56 days, male) 7.8
69608414 Antisense, RP_050426_04_A11, Mouse strain C57BL/6J (56 days, male) 6.4
Pallidum
Expression energy: 6.8
74882206 Antisense, RP_060315_04_E05, Mouse strain C57BL/6J (56 days, male) 7.1
69608414 Antisense, RP_050426_04_A11, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.