COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.3 nTPM
HPA:15.6 nTPM
GTEx:35.3 nTPM
FANTOM5:45.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB025016
Endothelial cells Medium
Glandular cells Medium



COLON - HPA RNA-seqi
Average nTPM 15.6
overview
Male, age 54 		Colon sample 67
nTPM: 27.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 23.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 13
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 13.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 13.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 17
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 35.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 32.7
Samples: 373

Max nTPM: 72.3
Min nTPM: 20.6
Std nTPM: 7.2
Median nTPM: 31.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 72.3
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 54.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 53.2
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 53.0
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 52.4
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 51.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 51.7
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 51.6
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 51.4
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 51.1
GTEX-13113-1426-SM-5EGHU 60-69 years, female 49.0
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Colon - Transverse
Average nTPM: 35.3
Samples: 406

Max nTPM: 80.0
Min nTPM: 16.7
Std nTPM: 10.6
Median nTPM: 32.9
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 80.0
GTEX-1N2DV-1426-SM-DPRYQ 40-49 years, male 74.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 68.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 66.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 65.8
GTEX-OHPM-1426-SM-3TW8Y 50-59 years, male 65.0
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 63.8
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 63.7
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 63.1
GTEX-R55D-1826-SM-48FEF 50-59 years, male 62.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 61.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 45.9
FF:10014-101C5 62,83,84 years, mixed 45.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.