COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.0 nTPM
HPA:13.8 nTPM
GTEx:59.0 nTPM
FANTOM5:95.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB010361
Endothelial cells Medium
Glandular cells Low
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 13.8
overview
Male, age 54 		Colon sample 67
nTPM: 9.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 13.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 15.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 17.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 13.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 13.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 14.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 14.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 18.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 59.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 59.0
Samples: 373

Max nTPM: 117.9
Min nTPM: 23.7
Std nTPM: 11.8
Median nTPM: 59.3
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 117.9
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 99.3
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 98.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 93.8
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 93.6
GTEX-145LT-0826-SM-5S2QL 40-49 years, male 87.2
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 86.2
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 83.2
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 83.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 82.0
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 81.3
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Colon - Transverse
Average nTPM: 43.8
Samples: 406

Max nTPM: 85.6
Min nTPM: 23.8
Std nTPM: 11.7
Median nTPM: 40.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 85.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 80.2
GTEX-11GSP-1626-SM-5986N 60-69 years, female 78.8
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 78.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 76.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 74.1
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 73.1
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 73.0
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 71.6
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 69.9
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 68.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 95.8
FF:10014-101C5 62,83,84 years, mixed 95.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.