HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:91.7 nTPM
HPA:91.7 nTPM
GTEx:81.3 nTPM
FANTOM5:199.8 Scaled Tags Per Million
Pig:104.9 nTPM
Mouse:93.8 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019053Antibody HPA019061
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.7
Sample id Sample description nTPM
Hippocampus
nTPM: 72.3
2621 Female, age 67, right hemisphere 81.2
1898 Male, age 80, left hemisphere 76.8
2529 Female, age 94, left hemisphere 75.3
1911 Female, age 85, right hemisphere 73.6
1855 Male, age 76, left hemisphere 71.4
2148 Female, age 91, left hemisphere 55.3
Dentate gyrus
nTPM: 73.7
2530 Female, age 94, left hemisphere 109.0
2010 Male, age 76, both hemispheres 77.1
2246 Female, age 85, both hemispheres 73.0
1927 Female, age 91, both hemispheres 63.4
2528 Male, age 74, both hemispheres 60.6
2531 Female, age 67, both hemispheres 59.4
Entorhinal gyrus
nTPM: 79.4
2686 Male, age 75, right hemisphere 106.9
2117 Female, age 91, right hemisphere 94.5
1938 Female, age 85, left hemisphere 76.0
2764 Male, age 80, right hemisphere 70.1
2613 Female, age 94, left hemisphere 69.8
1787 Male, age 76, left hemisphere 59.1
Hippocampus, CA1
nTPM: 62.0
1873 Female, age 85, both hemispheres 67.7
2749 Male, age 80, left hemisphere 67.0
2527 Male, age 74, both hemispheres 65.6
2045 Male, age 76, both hemispheres 55.4
2082 Female, age 91, right hemisphere 54.2
Hippocampus, CA2
nTPM: 72.2
2437 Female, age 94, left hemisphere 86.2
1963 Male, age 80, left hemisphere 83.6
1940 Female, age 85, left hemisphere 73.8
2249 Male, age 74, both hemispheres 65.5
1892 Male, age 76, both hemispheres 63.5
2113 Female, age 91, right hemisphere 60.6
Hippocampus, CA3
nTPM: 62.6
1891 Female, age 85, both hemispheres 85.2
1867 Male, age 76, both hemispheres 79.1
2137 Male, age 80, left hemisphere 62.3
2436 Male, age 74, both hemispheres 57.5
2861 Female, age 67, both hemispheres 49.9
2620 Female, age 94, left hemisphere 41.3
Parahippocampal cortex
nTPM: 73.3
2532 Female, age 72, left hemisphere 95.1
1850 Male, age 80, both hemispheres 90.2
2692 Male, age 74, both hemispheres 83.3
2018 Male, age 76, both hemispheres 78.4
1990 Female, age 91, right hemisphere 75.6
1933 Female, age 85, both hemispheres 70.2
2245 Female, age 91, both hemispheres 66.1
2693 Female, age 94, both hemispheres 61.7
2250 Female, age 67, right hemisphere 58.1
2622 Female, age 67, right hemisphere 54.6
Perirhinal gyrus
nTPM: 67.9
1841 Female, age 85, right hemisphere 74.3
2848 Male, age 76, right hemisphere 69.5
1794 Male, age 80, right hemisphere 67.2
1847 Female, age 91, left hemisphere 66.7
2521 Female, age 94, right hemisphere 61.9
Subiculum
nTPM: 91.7
2438 Female, age 94, left hemisphere 122.6
2042 Male, age 76, both hemispheres 118.6
1901 Male, age 80, both hemispheres 94.3
1977 Female, age 85, both hemispheres 74.5
2619 Male, age 74, both hemispheres 73.2
2729 Female, age 91, right hemisphere 66.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.3
Samples: 197

Max nTPM: 168.3
Min nTPM: 36.2
Std nTPM: 25.6
Median nTPM: 75.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 168.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 166.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 161.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 148.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 147.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 147.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 143.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 140.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 139.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 138.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 130.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.8
FF:10153-102I9 76 years, female 207.2
FF:10169-103B7 60 years, female 192.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 104.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 104.9
Samples: 4

Max nTPM: 133.5
Min nTPM: 69.3
Sample A Female 133.5
Sample B Female 92.0
Sample C Male 124.7
Sample D Male 69.3
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 92.9
Min nTPM: 66.0
Sample A Female 71.9
Sample B Female 92.9
Sample C Male 75.8
Sample D Male 66.0
Subiculum
nTPM: 71.8
Samples: 4

Max nTPM: 84.0
Min nTPM: 65.3
Sample A Female 84.0
Sample B Female 66.7
Sample C Male 65.3
Sample D Male 71.3
Ventral hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 95.5
Min nTPM: 65.5
Sample A Female 89.1
Sample B Female 65.5
Sample C Male 70.1
Sample D Male 95.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.7
Samples: 4

Max nTPM: 85.2
Min nTPM: 82.1
Sample A Male 83.7
Sample B Male 82.1
Sample C Female 85.2
Sample D Female 83.9
Hippocampal formation
nTPM: 93.8
Samples: 4

Max nTPM: 102.4
Min nTPM: 87.1
Sample A Male 87.7
Sample B Male 97.9
Sample C Female 102.4
Sample D Female 87.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
68301539 Antisense, RP_041130_01_D08, Mouse strain C57BL/6J (56 days, male) 7.2

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