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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:106.0 nTPM
HPA:106.0 nTPM
GTEx:139.1 nTPM
FANTOM5:278.8 Scaled Tags Per Million
Pig:160.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 106.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 88.4
2048 Male, age 55, midline 107.5
1981 Female, age 72, midline 102.0
2194 Female, age 79, both hemispheres 85.2
2816 Male, age 47, midline 77.8
2565 Male, age 75, midline 69.3
Cervical spinal cord, dorsal horn
nTPM: 102.5
2296 Male, age 66, both hemispheres 137.8
2173 Female, age 72, unknown 131.0
2069 Male, age 47, both hemispheres 105.3
1877 Male, age 55, unknown 88.5
2297 Male, age 75, both hemispheres 80.8
2721 Male, age 90, both hemispheres 71.7
Cervical spinal cord, ventral horn
nTPM: 106.0
2480 Male, age 75, both hemispheres 120.5
2809 Male, age 90, both hemispheres 116.2
2295 Male, age 66, both hemispheres 109.5
2098 Female, age 72, unknown 105.8
2068 Male, age 55, unknown 99.4
2820 Female, age 79, both hemispheres 84.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 139.1
Samples: 159

Max nTPM: 222.9
Min nTPM: 79.0
Std nTPM: 28.2
Median nTPM: 137.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 222.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 213.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 213.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 206.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 199.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 199.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 194.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 193.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 191.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 186.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 180.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 179.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 177.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 175.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 175.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 175.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 174.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 172.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 172.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 171.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 168.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 168.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 166.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 165.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 165.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 164.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 163.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 162.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 162.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 161.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 160.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 160.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 158.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 158.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 158.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 158.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 157.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 157.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 156.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 156.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 156.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 155.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 154.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 153.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 153.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 153.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 153.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 153.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 152.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 151.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 151.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 150.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 150.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 150.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 147.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 147.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 147.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 146.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 146.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 146.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 146.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 146.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 145.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 145.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 145.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 143.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 143.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 143.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 142.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 142.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 142.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 142.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 141.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 141.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 140.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 139.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 139.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 138.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 137.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 137.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 137.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 136.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 136.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 135.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 135.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 135.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 135.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 135.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 135.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 134.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 133.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 133.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 132.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 131.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 131.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 130.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 130.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 130.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 129.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 129.3
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 129.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 129.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 128.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 128.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 127.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 126.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 126.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 126.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 126.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 125.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 125.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 125.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 125.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 124.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 124.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 123.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 123.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 123.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 122.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 122.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 122.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 121.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 121.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 121.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 118.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 117.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 117.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 115.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 114.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 114.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 113.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 112.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 112.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 112.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 111.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 110.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 109.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 109.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 106.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 106.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 104.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 103.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 102.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 102.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 102.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 101.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 99.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 95.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 93.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 91.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 91.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 89.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 87.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 85.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 85.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 85.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 84.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 81.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 79.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 278.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 278.8
FF:10181-103D1 60 years, female 329.1
FF:10159-103A6 76 years, female 228.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 160.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 147.1
Samples: 4

Max nTPM: 166.7
Min nTPM: 134.7
Sample A Female 134.7
Sample B Female 166.7
Sample C Male 144.9
Sample D Male 141.9
Ventral spinal cord
nTPM: 160.1
Samples: 4

Max nTPM: 173.8
Min nTPM: 149.4
Sample A Female 159.7
Sample B Female 157.4
Sample C Male 149.4
Sample D Male 173.8

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