HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:85.7 nTPM
HPA:85.7 nTPM
GTEx:91.1 nTPM
FANTOM5:150.0 Scaled Tags Per Million
Pig:115.3 nTPM
Mouse:308.8 nTPM
Allen mouse:17.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042122Antibody HPA042770
Glial cells Not detectedNot detected
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.7
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
1898 Male, age 80, left hemisphere 83.7
2621 Female, age 67, right hemisphere 80.6
1855 Male, age 76, left hemisphere 65.5
2148 Female, age 91, left hemisphere 64.4
2529 Female, age 94, left hemisphere 61.3
1911 Female, age 85, right hemisphere 57.3
Dentate gyrus
nTPM: 60.9
2530 Female, age 94, left hemisphere 72.4
2531 Female, age 67, both hemispheres 67.5
1927 Female, age 91, both hemispheres 63.0
2010 Male, age 76, both hemispheres 61.1
2246 Female, age 85, both hemispheres 59.8
2528 Male, age 74, both hemispheres 41.7
Entorhinal gyrus
nTPM: 82.3
1787 Male, age 76, left hemisphere 98.3
2613 Female, age 94, left hemisphere 92.4
1938 Female, age 85, left hemisphere 88.5
2764 Male, age 80, right hemisphere 88.1
2686 Male, age 75, right hemisphere 80.5
2117 Female, age 91, right hemisphere 46.2
Hippocampus, CA1
nTPM: 71.9
2749 Male, age 80, left hemisphere 125.2
2527 Male, age 74, both hemispheres 73.2
1873 Female, age 85, both hemispheres 62.3
2082 Female, age 91, right hemisphere 50.2
2045 Male, age 76, both hemispheres 48.9
Hippocampus, CA2
nTPM: 67.8
1892 Male, age 76, both hemispheres 89.1
1963 Male, age 80, left hemisphere 87.1
2437 Female, age 94, left hemisphere 71.9
1940 Female, age 85, left hemisphere 57.3
2113 Female, age 91, right hemisphere 51.3
2249 Male, age 74, both hemispheres 50.3
Hippocampus, CA3
nTPM: 70.6
2137 Male, age 80, left hemisphere 112.1
2861 Female, age 67, both hemispheres 90.2
1867 Male, age 76, both hemispheres 70.6
2620 Female, age 94, left hemisphere 60.0
1891 Female, age 85, both hemispheres 51.5
2436 Male, age 74, both hemispheres 39.2
Parahippocampal cortex
nTPM: 74.1
2622 Female, age 67, right hemisphere 85.4
1850 Male, age 80, both hemispheres 84.2
2245 Female, age 91, both hemispheres 77.1
1990 Female, age 91, right hemisphere 75.9
2532 Female, age 72, left hemisphere 73.7
1933 Female, age 85, both hemispheres 72.4
2692 Male, age 74, both hemispheres 72.0
2018 Male, age 76, both hemispheres 67.1
2693 Female, age 94, both hemispheres 66.6
2250 Female, age 67, right hemisphere 66.3
Perirhinal gyrus
nTPM: 85.7
1847 Female, age 91, left hemisphere 105.0
1794 Male, age 80, right hemisphere 89.8
2848 Male, age 76, right hemisphere 80.8
2521 Female, age 94, right hemisphere 77.4
1841 Female, age 85, right hemisphere 75.6
Subiculum
nTPM: 63.6
2438 Female, age 94, left hemisphere 76.1
1977 Female, age 85, both hemispheres 74.1
1901 Male, age 80, both hemispheres 74.0
2619 Male, age 74, both hemispheres 68.3
2729 Female, age 91, right hemisphere 45.4
2042 Male, age 76, both hemispheres 44.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.1
Samples: 197

Max nTPM: 201.7
Min nTPM: 10.7
Std nTPM: 32.4
Median nTPM: 85.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 201.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 181.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 180.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 176.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 175.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 173.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 173.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 163.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 161.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 160.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 152.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 150.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 150.0
FF:10153-102I9 76 years, female 163.9
FF:10169-103B7 60 years, female 136.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.3
Samples: 4

Max nTPM: 144.4
Min nTPM: 86.6
Sample A Female 144.4
Sample B Female 134.5
Sample C Male 95.8
Sample D Male 86.6
Entorhinal cortex
nTPM: 112.7
Samples: 4

Max nTPM: 121.8
Min nTPM: 100.5
Sample A Female 114.8
Sample B Female 113.5
Sample C Male 121.8
Sample D Male 100.5
Subiculum
nTPM: 88.2
Samples: 4

Max nTPM: 120.4
Min nTPM: 71.5
Sample A Female 120.4
Sample B Female 79.5
Sample C Male 81.2
Sample D Male 71.5
Ventral hippocampus
nTPM: 102.3
Samples: 4

Max nTPM: 148.0
Min nTPM: 71.5
Sample A Female 86.7
Sample B Female 71.5
Sample C Male 102.9
Sample D Male 148.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 308.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 308.8
Samples: 4

Max nTPM: 329.5
Min nTPM: 290.4
Sample A Male 321.5
Sample B Male 329.5
Sample C Female 290.4
Sample D Female 293.8
Hippocampal formation
nTPM: 270.1
Samples: 4

Max nTPM: 278.9
Min nTPM: 261.6
Sample A Male 274.0
Sample B Male 265.7
Sample C Female 278.9
Sample D Female 261.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.1
74882698 Antisense, RP_060315_04_G04, Mouse strain C57BL/6J (56 days, male) 19.8
69817240 Antisense, RP_050510_02_H09, Mouse strain C57BL/6J (56 days, male) 14.4

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The Human Protein Atlas

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