HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		138.232
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:136.3 nTPM
HPA:136.3 nTPM
GTEx:281.6 nTPM
FANTOM5:168.9 Scaled Tags Per Million
Pig:121.8 nTPM
Mouse:372.1 nTPM
Allen mouse:23.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035876Antibody CAB002681
Glial cells Not detectedMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA035876
Hippocampal formation mean intensity 138.232
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 138.232
Molecular layer of the dentate gyrus 131.569
Granular dentate gyrus 83.638
CA1 - oriens layer 124.342
CA1 - pyramidal layer 97.738
CA1 - radiatum layer 134.938
CA2 - oriens layer 115.208
CA2 - pyramidal layer 96.340
CA2 - radiatum layer 131.253
CA3 - oriens layer 92.786
CA3 - pyramidal layer 68.755
CA3 - radiatum layer 101.618
Stratum lucidum 124.252
Lacunosum moleculare 122.031
Subiculum 92.021

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.3
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
1898 Male, age 80, left hemisphere 79.1
2148 Female, age 91, left hemisphere 61.8
2621 Female, age 67, right hemisphere 56.9
1855 Male, age 76, left hemisphere 44.2
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 54.3
2531 Female, age 67, both hemispheres 89.2
2530 Female, age 94, left hemisphere 76.5
1927 Female, age 91, both hemispheres 76.4
2246 Female, age 85, both hemispheres 37.1
2528 Male, age 74, both hemispheres 26.1
2010 Male, age 76, both hemispheres 20.7
Entorhinal gyrus
nTPM: 76.0
2613 Female, age 94, left hemisphere 127.4
2764 Male, age 80, right hemisphere 115.4
2686 Male, age 75, right hemisphere 83.9
1787 Male, age 76, left hemisphere 63.6
1938 Female, age 85, left hemisphere 61.4
2117 Female, age 91, right hemisphere 4.1
Hippocampus, CA1
nTPM: 31.2
1873 Female, age 85, both hemispheres 46.8
2045 Male, age 76, both hemispheres 45.7
2749 Male, age 80, left hemisphere 27.8
2082 Female, age 91, right hemisphere 26.4
2527 Male, age 74, both hemispheres 9.0
Hippocampus, CA2
nTPM: 33.6
2437 Female, age 94, left hemisphere 78.9
1892 Male, age 76, both hemispheres 74.2
1940 Female, age 85, left hemisphere 17.2
1963 Male, age 80, left hemisphere 15.7
2113 Female, age 91, right hemisphere 15.5
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 49.0
2620 Female, age 94, left hemisphere 159.8
2861 Female, age 67, both hemispheres 102.7
1867 Male, age 76, both hemispheres 25.0
1891 Female, age 85, both hemispheres 6.6
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 90.5
2622 Female, age 67, right hemisphere 137.2
2245 Female, age 91, both hemispheres 130.3
2693 Female, age 94, both hemispheres 124.2
1850 Male, age 80, both hemispheres 107.9
2532 Female, age 72, left hemisphere 91.5
1990 Female, age 91, right hemisphere 85.0
1933 Female, age 85, both hemispheres 77.8
2250 Female, age 67, right hemisphere 77.3
2692 Male, age 74, both hemispheres 44.3
2018 Male, age 76, both hemispheres 29.6
Perirhinal gyrus
nTPM: 136.3
1847 Female, age 91, left hemisphere 166.4
1794 Male, age 80, right hemisphere 160.6
2521 Female, age 94, right hemisphere 132.8
1841 Female, age 85, right hemisphere 123.8
2848 Male, age 76, right hemisphere 98.0
Subiculum
nTPM: 29.4
2438 Female, age 94, left hemisphere 62.6
2619 Male, age 74, both hemispheres 60.0
1977 Female, age 85, both hemispheres 48.2
1901 Male, age 80, both hemispheres 3.9
2729 Female, age 91, right hemisphere 1.6
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 281.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 281.6
Samples: 197

Max nTPM: 916.9
Min nTPM: 10.1
Std nTPM: 199.1
Median nTPM: 233.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 916.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 873.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 865.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 746.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 732.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 728.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 724.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 707.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 701.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 656.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 633.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 168.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.9
FF:10169-103B7 60 years, female 215.5
FF:10153-102I9 76 years, female 122.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.1
Samples: 4

Max nTPM: 81.0
Min nTPM: 73.3
Sample A Female 77.1
Sample B Female 73.3
Sample C Male 80.9
Sample D Male 81.0
Entorhinal cortex
nTPM: 121.8
Samples: 4

Max nTPM: 136.7
Min nTPM: 96.3
Sample A Female 132.6
Sample B Female 136.7
Sample C Male 96.3
Sample D Male 121.5
Subiculum
nTPM: 86.3
Samples: 4

Max nTPM: 117.8
Min nTPM: 71.2
Sample A Female 117.8
Sample B Female 71.2
Sample C Male 83.0
Sample D Male 73.1
Ventral hippocampus
nTPM: 82.9
Samples: 4

Max nTPM: 110.3
Min nTPM: 55.7
Sample A Female 84.0
Sample B Female 55.7
Sample C Male 110.3
Sample D Male 81.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 372.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 372.1
Samples: 4

Max nTPM: 410.7
Min nTPM: 333.7
Sample A Male 369.5
Sample B Male 374.4
Sample C Female 333.7
Sample D Female 410.7
Hippocampal formation
nTPM: 235.4
Samples: 4

Max nTPM: 256.7
Min nTPM: 212.8
Sample A Male 256.7
Sample B Male 212.8
Sample C Female 222.0
Sample D Female 249.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.7
100144408 Antisense, RP_110407_01_G07, Mouse strain C57BL/6J (56 days, male) 23.7

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