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PATHOLOGY CERVICAL CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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Dictionary
Cervical cancer
Human pathology
Cervical cancer
CERVICAL CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
ACTB is not prognostic in cervical cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 1322.38
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 1737.2
Number of samples 291
Samples
Sample Description FPKM
TCGA-IR-A3LK-01A 69 years, female, white, dead, 908 days 4086.8
TCGA-JX-A3PZ-01A 25 years, female, white, dead, 642 days 3762.5
TCGA-EA-A3Y4-01A 40 years, female, white, alive, 1122 days 3700.8
TCGA-EK-A2IP-01A 28 years, female, white, alive, 202 days 3635.0
TCGA-C5-A1BN-01B 26 years, female, white, dead, 166 days 3486.8
TCGA-VS-A9UB-01A 54 years, female, alive, 911 days 3366.3
TCGA-EA-A43B-01A 43 years, female, white, alive, 791 days 3091.9
TCGA-R2-A69V-01A 42 years, female, white, alive, 596 days 3087.1
TCGA-MA-AA3Y-01A 48 years, female, white, alive, 542 days 3041.4
TCGA-DR-A0ZM-01A 61 years, female, white, alive, 1791 days 3026.6
TCGA-C5-A0TN-01A 21 years, female, black or african american, dead, 348 days 3013.7
TCGA-DS-A1O9-01A 75 years, female, white, dead, 266 days 2987.2
TCGA-EK-A2H1-01A 20 years, female, white, alive, 799 days 2884.9
TCGA-DS-A0VN-01A 47 years, female, white, alive, 2910 days 2827.6
TCGA-C5-A1BK-01B 36 years, female, black or african american, alive, 5385 days 2791.9
TCGA-IR-A3LI-01A 48 years, female, white, alive, 2493 days 2778.7
TCGA-EK-A2R8-01A 48 years, female, white, alive, 44 days 2773.8
TCGA-VS-A94Y-01A 47 years, female, white, dead, 144 days 2737.5
TCGA-C5-A7UC-01A 48 years, female, white, dead, 523 days 2732.9
TCGA-C5-A7CH-01A 43 years, female, white, alive, 4694 days 2726.7
TCGA-VS-A950-01A 42 years, female, alive, 1221 days 2688.1
TCGA-JW-A5VL-01A 37 years, female, american indian or alaska native, alive, 474 days 2659.7
TCGA-C5-A907-01A 47 years, female, white, alive, 448 days 2612.1
TCGA-EA-A4BA-01A 49 years, female, white, alive, 755 days 2605.8
TCGA-DS-A0VM-01A 51 years, female, white, alive, 2128 days 2571.1
TCGA-UC-A7PD-01A 21 years, female, american indian or alaska native, dead, 355 days 2563.1
TCGA-GH-A9DA-01A 27 years, female, white, alive, 540 days 2535.9
TCGA-Q1-A73O-01A 37 years, female, alive, 428 days 2489.2
TCGA-BI-A0VS-01A 48 years, female, white, alive, 1735 days 2483.8
TCGA-DS-A1OB-01A 45 years, female, white, dead, 861 days 2473.5
TCGA-EK-A2RM-01A 40 years, female, white, alive, 50 days 2461.7
TCGA-VS-A9UH-01A 53 years, female, black or african american, alive, 1427 days 2459.3
TCGA-EX-A3L1-01A 32 years, female, white, alive, 463 days 2434.0
TCGA-C5-A1M7-01A 37 years, female, white, alive, 1409 days 2403.7
TCGA-EK-A2RA-01A 74 years, female, alive, 1246 days 2401.1
TCGA-MA-AA43-01A 48 years, female, white, alive, 346 days 2385.3
TCGA-C5-A7X3-01A 70 years, female, white, dead, 284 days 2377.4
TCGA-HM-A4S6-01A 51 years, female, white, alive, 454 days 2327.8
TCGA-IR-A3LH-01A 49 years, female, black or african american, alive, 2394 days 2306.5
TCGA-DS-A7WH-01A 34 years, female, white, alive, 533 days 2301.0
TCGA-JW-A5VG-01A 35 years, female, american indian or alaska native, alive, 834 days 2300.0
TCGA-EA-A3HT-01A 68 years, female, white, alive, 954 days 2275.1
TCGA-IR-A3LB-01A 53 years, female, white, dead, 2032 days 2269.4
TCGA-VS-A8EL-01A 38 years, female, black or african american, alive, 1992 days 2268.5
TCGA-IR-A3LL-01A 60 years, female, white, alive, 1106 days 2256.8
TCGA-MU-A8JM-01A 47 years, female, white, alive, 607 days 2254.2
TCGA-C5-A1BF-01B 46 years, female, white, dead, 570 days 2250.0
TCGA-LP-A4AW-01A 52 years, female, asian, alive, 27 days 2246.8
TCGA-C5-A7X8-01A 35 years, female, white, alive, 83 days 2246.3
TCGA-LP-A4AX-01A 45 years, female, asian, alive, 380 days 2219.5
TCGA-VS-A953-01A 63 years, female, dead, 477 days 2195.5
TCGA-FU-A3TQ-01A 55 years, female, white, alive, 795 days 2188.6
TCGA-EK-A3GJ-01A 51 years, female, native hawaiian or other pacific islander, alive, 3 days 2184.1
TCGA-MA-AA41-01A 33 years, female, white, alive, 254 days 2166.4
TCGA-DS-A7WI-01A 43 years, female, white, dead, 252 days 2144.3
TCGA-VS-A9UJ-01A 55 years, female, dead, 52 days 2134.5
TCGA-DS-A7WF-01A 41 years, female, dead, 492 days 2126.7
TCGA-EK-A2RN-01A 45 years, female, white, alive, 71 days 2124.0
TCGA-C5-A2LV-01A 36 years, female, black or african american, alive, 2234 days 2114.5
TCGA-EA-A411-01A 50 years, female, white, alive, 747 days 2111.7
TCGA-DS-A1OD-01A 49 years, female, white, alive, 3874 days 2107.9
TCGA-IR-A3LC-01A 40 years, female, white, alive, 3935 days 2103.7
TCGA-FU-A3WB-01A 43 years, female, white, alive, 491 days 2097.3
TCGA-EK-A2PG-01A 89 years, female, black or african american, alive, 46 days 2088.9
TCGA-EK-A2RK-01A 67 years, female, white, alive, 13 days 2082.4
TCGA-VS-A8EB-01A 41 years, female, white, dead, 305 days 2074.5
TCGA-Q1-A5R3-01A 56 years, female, white, alive, 485 days 2070.9
TCGA-C5-A7UH-01A 55 years, female, white, alive, 3988 days 2044.8
TCGA-C5-A8YR-01A 56 years, female, white, dead, 837 days 2039.6
TCGA-C5-A8XK-01A 30 years, female, black or african american, alive, 3039 days 2035.7
TCGA-ZJ-AAXA-01A 64 years, female, white, alive, 43 days 2032.6
TCGA-JX-A3Q0-01A 63 years, female, black or african american, alive, 6375 days 2022.8
TCGA-MU-A51Y-01A 27 years, female, white, alive, 854 days 2017.2
TCGA-EX-A1H6-01B 38 years, female, white, alive, 241 days 2014.9
TCGA-EA-A410-01A 51 years, female, white, alive, 803 days 2006.2
TCGA-MY-A5BE-01A 42 years, female, black or african american, alive, 1066 days 2000.8
TCGA-VS-A8Q8-01A 26 years, female, white, dead, 978 days 1995.8
TCGA-EK-A2RE-01A 26 years, female, white, alive, 57 days 1990.7
TCGA-Q1-A6DT-01A 55 years, female, white, dead, 275 days 1981.6
TCGA-HM-A3JK-01A 64 years, female, white, alive, 632 days 1975.7
TCGA-C5-A2LT-01A 38 years, female, white, alive, 2226 days 1975.6
TCGA-MA-AA3X-01A 50 years, female, black or african american, alive, 595 days 1972.3
TCGA-VS-A958-01A 46 years, female, white, alive, 1525 days 1969.7
TCGA-EA-A1QS-01A 46 years, female, white, alive, 1203 days 1965.5
TCGA-LP-A4AU-01A 35 years, female, asian, alive, 343 days 1964.8
TCGA-VS-AA62-01A 51 years, female, white, dead, 469 days 1964.7
TCGA-DS-A0VL-01A 25 years, female, white, alive, 1692 days 1964.7
TCGA-EK-A2RJ-01A 51 years, female, white, alive, 53 days 1958.4
TCGA-MA-AA3W-01A 54 years, female, white, alive, 685 days 1947.5
TCGA-FU-A57G-01A 49 years, female, white, alive, 1078 days 1945.0
TCGA-VS-A8QA-01A 44 years, female, alive, 1099 days 1940.9
TCGA-DG-A2KL-01A 53 years, female, alive, 1367 days 1928.6
TCGA-VS-A8QF-01A 42 years, female, white, alive, 1800 days 1924.0
TCGA-4J-AA1J-01A 31 years, female, white, alive, 542 days 1917.7
TCGA-FU-A3TX-01A 78 years, female, alive, 45 days 1903.2
TCGA-EK-A2RO-01A 59 years, female, american indian or alaska native, alive, 2 days 1902.8
TCGA-2W-A8YY-01A 51 years, female, white, alive, 533 days 1886.8
TCGA-MY-A913-01A 28 years, female, black or african american, alive, 524 days 1879.5
TCGA-EA-A50E-01A 45 years, female, asian, dead, 227 days 1879.5
TCGA-VS-A94X-01A 40 years, female, black or african american, dead, 506 days 1863.2
TCGA-C5-A1MK-01A 79 years, female, white, dead, 74 days 1857.5
TCGA-EA-A3HR-01A 57 years, female, white, alive, 940 days 1856.2
TCGA-C5-A1MQ-01A 35 years, female, white, alive, 1031 days 1853.7
TCGA-EA-A3QD-01A 59 years, female, white, alive, 397 days 1848.5
TCGA-EK-A2PL-01A 36 years, female, white, alive, 13 days 1845.4
TCGA-ZX-AA5X-01A 64 years, female, white, alive, 119 days 1832.4
TCGA-C5-A2LY-01A 30 years, female, white, alive, 2383 days 1828.3
TCGA-XS-A8TJ-01A 41 years, female, black or african american, alive, 890 days 1826.4
TCGA-DS-A5RQ-01A 80 years, female, white, alive, 512 days 1824.4
TCGA-VS-A94Z-01A 38 years, female, white, alive, 1015 days 1818.7
TCGA-C5-A2LX-01A 54 years, female, white, alive, 2526 days 1818.0
TCGA-EA-A78R-01A 54 years, female, asian, alive, 410 days 1817.7
TCGA-EA-A5ZF-01A 56 years, female, asian, alive, 828 days 1804.7
TCGA-C5-A2LS-01A 37 years, female, white, alive, 1345 days 1802.5
TCGA-Q1-A6DV-01A 36 years, female, asian, alive, 491 days 1801.5
TCGA-C5-A3HE-01A 44 years, female, white, alive, 548 days 1800.5
TCGA-JW-A5VJ-01A 56 years, female, american indian or alaska native, alive, 652 days 1789.4
TCGA-BI-A0VR-01A 53 years, female, white, alive, 1505 days 1788.2
TCGA-C5-A1MN-01A 42 years, female, white, dead, 1245 days 1784.3
TCGA-FU-A23L-01A 60 years, female, white, alive, 725 days 1783.8
TCGA-C5-A8XI-01A 69 years, female, black or african american, alive, 254 days 1782.5
TCGA-VS-A9UD-01A 73 years, female, white, alive, 739 days 1780.6
TCGA-C5-A1BM-01A 78 years, female, black or african american, dead, 2520 days 1770.1
TCGA-VS-A8EK-01A 65 years, female, white, dead, 829 days 1760.9
TCGA-FU-A3HY-01A 47 years, female, white, alive, 954 days 1753.8
TCGA-EK-A2PK-01A 43 years, female, white, alive, 12 days 1749.1
TCGA-HM-A3JJ-01A 40 years, female, black or african american, dead, 659 days 1736.5
TCGA-EA-A5O9-01A 39 years, female, white, alive, 788 days 1730.4
TCGA-UC-A7PG-01A 44 years, female, white, dead, 370 days 1723.6
TCGA-C5-A8XH-01A 39 years, female, white, dead, 1394 days 1714.1
TCGA-C5-A1M9-01A 46 years, female, white, dead, 1065 days 1714.1
TCGA-DG-A2KK-01A 51 years, female, alive, 2496 days 1702.4
TCGA-DG-A2KM-01A 46 years, female, alive, 1946 days 1701.8
TCGA-LP-A5U3-01A 40 years, female, asian, alive, 25 days 1701.1
TCGA-VS-A9UY-01A 29 years, female, dead, 555 days 1696.9
TCGA-C5-A1MH-01A 71 years, female, white, dead, 1186 days 1691.3
TCGA-EA-A3HU-01A 43 years, female, white, alive, 1013 days 1667.4
TCGA-C5-A7X5-01A 72 years, female, black or african american, dead, 414 days 1667.3
TCGA-JW-A5VK-01A 43 years, female, black or african american, alive, 623 days 1660.3
TCGA-C5-A8YT-01A 36 years, female, white, dead, 633 days 1656.3
TCGA-MY-A5BD-01A 62 years, female, white, alive, 1667 days 1636.4
TCGA-VS-A94W-01A 39 years, female, white, alive, 1243 days 1631.3
TCGA-Q1-A5R2-01A 64 years, female, white, alive, 499 days 1627.3
TCGA-ZJ-A8QR-01A 38 years, female, native hawaiian or other pacific islander, dead, 582 days 1626.5
TCGA-C5-A1BJ-01A 34 years, female, white, alive, 4385 days 1622.2
TCGA-C5-A7UE-01A 45 years, female, white, alive, 4738 days 1621.8
TCGA-VS-A954-01A 67 years, female, alive, 1714 days 1621.0
TCGA-EK-A2RL-01A 33 years, female, black or african american, dead, 1453 days 1620.9
TCGA-EK-A2GZ-01A 64 years, female, black or african american, alive, 383 days 1604.9
TCGA-C5-A1M5-01A 53 years, female, white, dead, 2052 days 1603.7
TCGA-FU-A3EO-01A 55 years, female, white, alive, 490 days 1600.6
TCGA-Q1-A73R-01A 45 years, female, white, alive, 567 days 1595.6
TCGA-EK-A2RB-01A 48 years, female, white, alive, 9 days 1582.6
TCGA-RA-A741-01A 34 years, female, white, alive, 444 days 1580.7
TCGA-FU-A23K-01A 28 years, female, white, alive, 372 days 1579.8
TCGA-VS-A9U7-01A 30 years, female, white, alive, 1472 days 1578.4
TCGA-EA-A97N-01A 38 years, female, white, alive, 11 days 1569.3
TCGA-EA-A5FO-01A 59 years, female, white, alive, 815 days 1567.4
TCGA-DS-A1OA-01A 77 years, female, asian, dead, 879 days 1566.6
TCGA-EA-A556-01A 38 years, female, white, alive, 453 days 1562.7
TCGA-C5-A2M1-01A 37 years, female, white, alive, 1169 days 1561.5
TCGA-EA-A439-01A 50 years, female, asian, alive, 965 days 1552.9
TCGA-C5-A1BE-01B 65 years, female, white, dead, 2094 days 1545.0
TCGA-VS-A9UR-01A 53 years, female, white, alive, 793 days 1526.0
TCGA-DG-A2KJ-01A 50 years, female, alive, 2893 days 1521.3
TCGA-EK-A2H0-01A 24 years, female, white, alive, 1847 days 1520.8
TCGA-EK-A2R9-01A 58 years, female, white, alive, 4 days 1510.5
TCGA-VS-A8QC-01A 51 years, female, white, dead, 350 days 1508.2
TCGA-DS-A1OC-01A 47 years, female, white, alive, 376 days 1508.1
TCGA-ZJ-AAX4-01A 85 years, female, white, alive, 21 days 1504.0
TCGA-VS-A8QH-01A 76 years, female, white, dead, 1210 days 1500.3
TCGA-Q1-A73S-01A 33 years, female, white, alive, 688 days 1498.1
TCGA-C5-A1ME-01A 41 years, female, white, alive, 1756 days 1492.8
TCGA-JX-A5QV-01A 37 years, female, white, alive, 636 days 1488.8
TCGA-MA-AA3Z-01A 43 years, female, white, alive, 595 days 1487.2
TCGA-VS-A9UI-01A 76 years, female, white, dead, 1372 days 1484.3
TCGA-FU-A3YQ-01A 35 years, female, white, alive, 861 days 1477.7
TCGA-C5-A1BQ-01C 65 years, female, white, dead, 604 days 1475.9
TCGA-VS-A959-01A 76 years, female, alive, 1561 days 1474.8
TCGA-JW-A5VI-01A 45 years, female, american indian or alaska native, alive, 747 days 1471.9
TCGA-Q1-A5R1-01A 32 years, female, white, alive, 474 days 1471.0
TCGA-MA-AA42-01A 75 years, female, white, alive, 259 days 1470.6
TCGA-FU-A3HZ-01A 64 years, female, white, alive, 1103 days 1470.2
TCGA-C5-A1BL-01A 32 years, female, white, alive, 5271 days 1467.8
TCGA-C5-A3HL-01A 76 years, female, white, alive, 621 days 1461.2
TCGA-VS-A9V1-01A 46 years, female, white, dead, 157 days 1460.3
TCGA-C5-A2LZ-01A 65 years, female, white, dead, 3046 days 1459.6
TCGA-EX-A69L-01A 41 years, female, asian, alive, 602 days 1458.6
TCGA-IR-A3LF-01A 64 years, female, white, alive, 2949 days 1458.0
TCGA-C5-A1BI-01B 31 years, female, white, alive, 1112 days 1455.2
TCGA-VS-A9V0-01A 58 years, female, alive, 573 days 1454.1
TCGA-JW-A852-01A 42 years, female, white, dead, 252 days 1453.9
TCGA-EA-A5ZE-01A 54 years, female, asian, alive, 829 days 1447.1
TCGA-WL-A834-01A female, white, alive, 791 days 1440.8
TCGA-EK-A3GN-01A 47 years, female, white, alive, 27 days 1438.2
TCGA-VS-A9V4-01A 63 years, female, white, dead, 132 days 1434.6
TCGA-C5-A7UI-01A 42 years, female, black or african american, dead, 2888 days 1431.2
TCGA-Q1-A73Q-01A 46 years, female, white, alive, 284 days 1430.2
TCGA-EK-A2RC-01A 33 years, female, alive, 129 days 1429.3
TCGA-EA-A5ZD-01A 40 years, female, asian, alive, 830 days 1424.8
TCGA-ZJ-A8QQ-01A 24 years, female, white, alive, 2056 days 1421.9
TCGA-VS-A8QM-01A 47 years, female, dead, 951 days 1421.1
TCGA-C5-A905-01A 37 years, female, black or african american, alive, 4879 days 1416.8
TCGA-FU-A770-01A 33 years, female, white, alive, 34 days 1399.4
TCGA-MY-A5BF-01A 68 years, female, white, alive, 634 days 1397.0
TCGA-EX-A8YF-01A 44 years, female, white, alive, 473 days 1394.7
TCGA-MU-A5YI-01A 60 years, female, black or african american, alive, 1053 days 1391.9
TCGA-DS-A0VK-01A 46 years, female, white, dead, 1118 days 1391.2
TCGA-VS-A9UL-01A 79 years, female, white, dead, 442 days 1383.8
TCGA-C5-A1MI-01A 50 years, female, white, dead, 1083 days 1378.5
TCGA-JW-A69B-01A 44 years, female, white, alive, 863 days 1373.0
TCGA-LP-A7HU-01A 53 years, female, asian, alive, 406 days 1372.9
TCGA-C5-A3HF-01A 24 years, female, white, dead, 543 days 1367.3
TCGA-BI-A20A-01A 49 years, female, white, alive, 720 days 1355.2
TCGA-UC-A7PF-01A 44 years, female, dead, 2859 days 1353.2
TCGA-C5-A7CJ-01A 42 years, female, white, dead, 3097 days 1334.9
TCGA-C5-A8ZZ-01A 41 years, female, white, alive, 636 days 1332.8
TCGA-FU-A3NI-01A 45 years, female, white, dead, 638 days 1325.8
TCGA-VS-A8EJ-01A 60 years, female, white, dead, 607 days 1324.1
TCGA-Q1-A6DW-01A 44 years, female, white, alive, 534 days 1320.7
TCGA-EA-A3HQ-01A 60 years, female, white, alive, 1136 days 1314.2
TCGA-VS-A8Q9-01A 79 years, female, white, alive, 1630 days 1313.4
TCGA-C5-A7CG-01A 55 years, female, white, alive, 6408 days 1308.7
TCGA-VS-A9UZ-01A 61 years, female, white, alive, 2044 days 1306.7
TCGA-DR-A0ZL-01A 53 years, female, asian, alive, 2669 days 1306.4
TCGA-C5-A7CO-01A 68 years, female, white, alive, 4482 days 1305.6
TCGA-VS-A9UQ-01A 32 years, female, alive, 1263 days 1300.5
TCGA-VS-A9UC-01A 32 years, female, alive, 825 days 1299.2
TCGA-C5-A1M6-01A 55 years, female, white, dead, 955 days 1297.9
TCGA-FU-A5XV-01A 32 years, female, white, alive, 321 days 1293.4
TCGA-VS-A952-01A 66 years, female, white, alive, 1778 days 1290.1
TCGA-C5-A1MF-01A 49 years, female, white, alive, 1617 days 1288.4
TCGA-JX-A3Q8-01A 40 years, female, asian, alive, 1357 days 1288.0
TCGA-C5-A3HD-01B 51 years, female, white, alive, 1582 days 1287.1
TCGA-EA-A44S-01A 31 years, female, white, alive, 369 days 1286.8
TCGA-EK-A3GK-01A 33 years, female, white, alive, 15 days 1282.9
TCGA-VS-A9U6-01A 52 years, female, white, alive, 1320 days 1275.1
TCGA-JW-AAVH-01A 46 years, female, white, alive, 552 days 1273.5
TCGA-HG-A2PA-01A 38 years, female, white, dead, 773 days 1269.3
TCGA-C5-A1MJ-01A 61 years, female, white, dead, 14 days 1266.5
TCGA-C5-A8YQ-01A 79 years, female, white, dead, 715 days 1264.4
TCGA-JW-A5VH-01A 53 years, female, american indian or alaska native, dead, 100 days 1248.7
TCGA-C5-A7XC-01A 26 years, female, white, alive, 1551 days 1239.2
TCGA-VS-A9V5-01A 50 years, female, white, dead, 494 days 1228.9
TCGA-C5-A901-01A 44 years, female, white, alive, 518 days 1226.8
TCGA-VS-A8EG-01A 36 years, female, alive, 1386 days 1226.0
TCGA-EK-A2PM-01A 81 years, female, white, alive, 18 days 1224.0
TCGA-EA-A1QT-01A 47 years, female, white, alive, 1243 days 1215.3
TCGA-C5-A1M8-01A 43 years, female, white, alive, 919 days 1213.6
TCGA-VS-A9V3-01A 62 years, female, white, alive, 540 days 1191.9
TCGA-EX-A69M-01A 62 years, female, white, dead, 253 days 1188.9
TCGA-PN-A8MA-01A 43 years, female, black or african american, alive, 90 days 1181.5
TCGA-VS-A9UU-01A 42 years, female, alive, 442 days 1179.3
TCGA-EX-A1H5-01A 58 years, female, black or african american, alive, 619 days 1178.4
TCGA-Q1-A73P-01A 45 years, female, white, alive, 483 days 1165.2
TCGA-FU-A2QG-01A 29 years, female, white, alive, 579 days 1157.6
TCGA-VS-A8EI-01A 38 years, female, white, alive, 729 days 1156.1
TCGA-IR-A3LA-01A 60 years, female, white, alive, 4172 days 1150.5
TCGA-C5-A1MP-01A 34 years, female, black or african american, alive, 109 days 1142.9
TCGA-HM-A6W2-01A 35 years, female, black or african american, alive, 287 days 1140.1
TCGA-EA-A6QX-01A 49 years, female, asian, alive, 730 days 1130.7
TCGA-VS-A9UT-01A 72 years, female, asian, alive, 482 days 1125.4
TCGA-EK-A2PI-01A 44 years, female, white, alive, 586 days 1112.5
TCGA-EK-A2R7-01A 45 years, female, white, alive, 27 days 1110.7
TCGA-FU-A40J-01A 38 years, female, white, alive, 426 days 1104.3
TCGA-DG-A2KH-01A 25 years, female, alive, 34 days 1087.6
TCGA-C5-A8XJ-01A 74 years, female, white, alive, 4467 days 1086.2
TCGA-EA-A3QE-01A 45 years, female, white, alive, 761 days 1069.5
TCGA-VS-A9U5-01A 57 years, female, white, alive, 1535 days 1068.2
TCGA-EX-A449-01A 42 years, female, white, alive, 447 days 1065.7
TCGA-VS-A9UV-01A 74 years, female, dead, 104 days 1065.4
TCGA-VS-A9UM-01A 39 years, female, black or african american, dead, 829 days 1053.3
TCGA-EA-A3HS-01A 35 years, female, white, alive, 959 days 1051.6
TCGA-C5-A7CL-01A 48 years, female, white, dead, 471 days 1037.3
TCGA-DS-A3LQ-01A 46 years, female, alive, 699 days 1034.4
TCGA-VS-A9V2-01A 29 years, female, white, alive, 555 days 1008.2
TCGA-C5-A7CM-01A 35 years, female, white, alive, 619 days 993.2
TCGA-LP-A5U2-01A 30 years, female, asian, alive, 9 days 985.9
TCGA-ZJ-AAXU-01A 51 years, female, white, alive, 5 days 982.6
TCGA-VS-A9UO-01A 43 years, female, white, alive, 1456 days 971.0
TCGA-C5-A902-01A 35 years, female, black or african american, alive, 149 days 960.5
TCGA-C5-A2M2-01A 56 years, female, white, dead, 1011 days 930.9
TCGA-UC-A7PI-01A 45 years, female, white, alive, 2114 days 930.0
TCGA-EK-A2IR-01A 48 years, female, white, alive, 3442 days 929.2
TCGA-C5-A1ML-01A 49 years, female, white, dead, 636 days 903.0
TCGA-VS-A957-01A 64 years, female, white, alive, 1688 days 902.6
TCGA-VS-A8EC-01A 55 years, female, white, alive, 1415 days 878.5
TCGA-VS-A9UP-01A 43 years, female, alive, 1444 days 843.8
TCGA-C5-A7CK-01A 58 years, female, white, dead, 4086 days 816.9
TCGA-VS-A8EH-01A 56 years, female, alive, 986 days 814.7
TCGA-IR-A3L7-01A 37 years, female, white, alive, 4483 days 796.0
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CERVICAL CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA041264

Antibody HPA041271

Antibody CAB002621
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.