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RAB7A
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  • RAB7A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:157.9 nTPM
FANTOM5:313.6 Scaled Tags Per Million
Pig:137.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006964Antibody CAB037131
Glial cells HighLow
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 157.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 157.9
Samples: 246

Max nTPM: 267.8
Min nTPM: 120.1
Std nTPM: 18.9
Median nTPM: 154.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 267.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 243.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 235.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 231.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 226.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 213.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 211.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 207.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 194.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 193.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 192.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 191.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 188.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 186.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 184.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 183.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 182.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 182.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 179.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 179.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 178.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 178.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 177.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 177.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 176.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 175.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 175.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 175.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 175.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 174.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 173.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 173.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 172.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 172.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 172.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 171.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 171.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 171.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 171.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 171.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 170.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 170.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 170.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 170.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 170.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 169.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 169.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 167.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 167.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 167.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 166.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 166.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 166.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 166.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 166.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 166.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 166.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 165.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 165.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 165.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 165.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 164.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 164.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 164.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 163.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 163.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 163.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 163.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 163.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 163.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 162.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 162.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 162.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 162.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 162.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 162.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 162.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 162.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 162.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 161.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 160.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 160.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 160.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 160.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 160.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 160.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 159.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 159.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 158.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 158.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 158.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 157.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 157.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 157.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 157.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 157.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 156.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 156.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 156.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 156.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 156.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 156.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 156.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 156.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 156.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 155.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 155.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 155.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 155.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 155.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 155.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 155.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 155.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 155.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 154.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 154.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 154.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 154.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 154.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 154.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 153.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 153.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 153.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 153.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 153.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 153.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 153.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 153.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 153.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 153.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 153.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 153.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 153.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 153.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 152.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 152.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 152.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 152.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 152.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 152.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 152.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 152.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 152.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 151.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 151.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 151.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 151.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 151.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 151.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 151.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 151.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 151.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 151.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 150.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 150.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 150.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 150.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 150.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 149.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 149.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 149.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 149.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 149.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 149.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 149.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 149.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 149.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 149.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 148.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 148.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 147.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 147.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 146.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 146.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 146.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 146.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 146.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 146.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 146.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 145.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 145.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 145.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 145.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 145.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 145.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 144.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 144.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 144.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 144.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 143.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 143.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 143.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 142.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 142.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 142.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 142.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 141.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 141.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 141.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 141.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 140.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 140.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 140.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 140.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 139.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 139.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 139.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 138.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 138.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 138.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 138.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 137.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 137.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 136.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 136.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 136.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 136.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 136.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 135.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 135.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 135.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 134.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 134.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 134.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 134.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 131.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 130.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 129.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 128.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 126.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 120.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 313.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 313.6
FF:10164-103B2 76 years, female 313.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 137.3
Pig sample Sample description nTPM
Caudate
nTPM: 137.3
Samples: 4

Max nTPM: 164.0
Min nTPM: 119.2
Sample A Female 126.0
Sample B Female 140.0
Sample C Male 164.0
Sample D Male 119.2

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