HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.3 nTPM
HPA:52.3 nTPM
GTEx:43.9 nTPM
FANTOM5:69.9 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:25.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054246
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.3
Sample id Sample description nTPM
Hippocampus
nTPM: 47.9
2529 Female, age 94, left hemisphere 51.8
1855 Male, age 76, left hemisphere 50.8
1911 Female, age 85, right hemisphere 50.6
2621 Female, age 67, right hemisphere 46.9
2148 Female, age 91, left hemisphere 44.8
1898 Male, age 80, left hemisphere 42.8
Dentate gyrus
nTPM: 46.9
2530 Female, age 94, left hemisphere 60.1
2010 Male, age 76, both hemispheres 47.3
2246 Female, age 85, both hemispheres 46.5
2531 Female, age 67, both hemispheres 45.3
2528 Male, age 74, both hemispheres 45.2
1927 Female, age 91, both hemispheres 37.1
Entorhinal gyrus
nTPM: 45.9
2117 Female, age 91, right hemisphere 53.7
2764 Male, age 80, right hemisphere 47.8
2613 Female, age 94, left hemisphere 46.7
2686 Male, age 75, right hemisphere 44.5
1787 Male, age 76, left hemisphere 44.1
1938 Female, age 85, left hemisphere 38.4
Hippocampus, CA1
nTPM: 41.7
2527 Male, age 74, both hemispheres 47.3
2082 Female, age 91, right hemisphere 45.7
1873 Female, age 85, both hemispheres 42.2
2045 Male, age 76, both hemispheres 38.2
2749 Male, age 80, left hemisphere 35.3
Hippocampus, CA2
nTPM: 44.7
2437 Female, age 94, left hemisphere 49.2
1963 Male, age 80, left hemisphere 47.6
2249 Male, age 74, both hemispheres 45.9
1940 Female, age 85, left hemisphere 45.3
2113 Female, age 91, right hemisphere 44.9
1892 Male, age 76, both hemispheres 35.1
Hippocampus, CA3
nTPM: 42.1
2620 Female, age 94, left hemisphere 47.4
1891 Female, age 85, both hemispheres 45.9
2861 Female, age 67, both hemispheres 43.2
1867 Male, age 76, both hemispheres 41.1
2436 Male, age 74, both hemispheres 39.4
2137 Male, age 80, left hemisphere 35.8
Parahippocampal cortex
nTPM: 41.1
2692 Male, age 74, both hemispheres 50.9
2532 Female, age 72, left hemisphere 45.6
2018 Male, age 76, both hemispheres 44.6
1990 Female, age 91, right hemisphere 43.3
2622 Female, age 67, right hemisphere 42.6
2693 Female, age 94, both hemispheres 39.2
2245 Female, age 91, both hemispheres 38.2
1850 Male, age 80, both hemispheres 37.6
1933 Female, age 85, both hemispheres 34.8
2250 Female, age 67, right hemisphere 34.6
Perirhinal gyrus
nTPM: 34.8
2848 Male, age 76, right hemisphere 37.6
1794 Male, age 80, right hemisphere 35.5
2521 Female, age 94, right hemisphere 35.2
1847 Female, age 91, left hemisphere 33.2
1841 Female, age 85, right hemisphere 32.6
Subiculum
nTPM: 52.3
2042 Male, age 76, both hemispheres 62.6
2438 Female, age 94, left hemisphere 56.6
2619 Male, age 74, both hemispheres 51.4
1901 Male, age 80, both hemispheres 50.7
2729 Female, age 91, right hemisphere 46.5
1977 Female, age 85, both hemispheres 46.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.9
Samples: 197

Max nTPM: 95.6
Min nTPM: 16.2
Std nTPM: 15.2
Median nTPM: 41.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 95.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 88.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 87.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 83.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 83.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 82.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 79.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 77.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 77.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 75.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 73.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.9
FF:10153-102I9 76 years, female 71.8
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 30.3
Min nTPM: 16.2
Sample A Female 30.3
Sample B Female 21.1
Sample C Male 29.1
Sample D Male 16.2
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.1
Sample A Female 16.7
Sample B Female 17.8
Sample C Male 16.4
Sample D Male 14.1
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.7
Sample A Female 21.1
Sample B Female 17.6
Sample C Male 17.1
Sample D Male 16.7
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.4
Sample A Female 20.5
Sample B Female 16.4
Sample C Male 24.8
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 19.8
Sample A Male 22.0
Sample B Male 21.2
Sample C Female 22.1
Sample D Female 19.8
Hippocampal formation
nTPM: 25.1
Samples: 4

Max nTPM: 28.6
Min nTPM: 21.2
Sample A Male 21.2
Sample B Male 23.3
Sample C Female 27.2
Sample D Female 28.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
386015 Antisense, RP_040804_01_A02, Mouse strain C57BL/6J (56 days, male) 0.0

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